Protein–RNA interactions for Protein: E0CXF8

BC035044, cDNA sequence BC035044, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC035044E0CXF8 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC035044E0CXF8 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
BC035044E0CXF8 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
BC035044E0CXF8 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
BC035044E0CXF8 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC035044E0CXF8 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
BC035044E0CXF8 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC035044E0CXF8 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC035044E0CXF8 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC12.79□□□□□ -0.36
BC035044E0CXF8 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
BC035044E0CXF8 Gm27357-201ENSMUST00000183754 135 ntBASIC12.79□□□□□ -0.36
BC035044E0CXF8 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.79□□□□□ -0.36
BC035044E0CXF8 Gm6296-201ENSMUST00000222599 943 ntBASIC12.79□□□□□ -0.36
BC035044E0CXF8 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC035044E0CXF8 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC035044E0CXF8 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC035044E0CXF8 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC035044E0CXF8 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC035044E0CXF8 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.79□□□□□ -0.36
BC035044E0CXF8 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC035044E0CXF8 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
BC035044E0CXF8 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.79□□□□□ -0.36
BC035044E0CXF8 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
BC035044E0CXF8 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC035044E0CXF8 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
BC035044E0CXF8 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
BC035044E0CXF8 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC035044E0CXF8 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC035044E0CXF8 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC035044E0CXF8 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC035044E0CXF8 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
BC035044E0CXF8 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC035044E0CXF8 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
BC035044E0CXF8 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
BC035044E0CXF8 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
BC035044E0CXF8 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BC035044E0CXF8 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
BC035044E0CXF8 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BC035044E0CXF8 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BC035044E0CXF8 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BC035044E0CXF8 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BC035044E0CXF8 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BC035044E0CXF8 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BC035044E0CXF8 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BC035044E0CXF8 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.78□□□□□ -0.36
BC035044E0CXF8 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BC035044E0CXF8 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
BC035044E0CXF8 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
BC035044E0CXF8 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BC035044E0CXF8 Gm11780-201ENSMUST00000136880 516 ntBASIC12.78□□□□□ -0.36
BC035044E0CXF8 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
BC035044E0CXF8 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BC035044E0CXF8 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
BC035044E0CXF8 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
BC035044E0CXF8 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
BC035044E0CXF8 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BC035044E0CXF8 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BC035044E0CXF8 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BC035044E0CXF8 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BC035044E0CXF8 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.78□□□□□ -0.36
BC035044E0CXF8 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BC035044E0CXF8 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BC035044E0CXF8 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
BC035044E0CXF8 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BC035044E0CXF8 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BC035044E0CXF8 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BC035044E0CXF8 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC12.78□□□□□ -0.36
BC035044E0CXF8 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
BC035044E0CXF8 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
BC035044E0CXF8 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.77□□□□□ -0.36
BC035044E0CXF8 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
BC035044E0CXF8 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
BC035044E0CXF8 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
BC035044E0CXF8 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
BC035044E0CXF8 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BC035044E0CXF8 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BC035044E0CXF8 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC12.77□□□□□ -0.37
BC035044E0CXF8 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.77□□□□□ -0.37
BC035044E0CXF8 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.77□□□□□ -0.37
BC035044E0CXF8 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
BC035044E0CXF8 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC12.77□□□□□ -0.37
BC035044E0CXF8 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC12.77□□□□□ -0.37
BC035044E0CXF8 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BC035044E0CXF8 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
BC035044E0CXF8 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
BC035044E0CXF8 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BC035044E0CXF8 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
BC035044E0CXF8 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
BC035044E0CXF8 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
BC035044E0CXF8 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BC035044E0CXF8 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.77□□□□□ -0.37
BC035044E0CXF8 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BC035044E0CXF8 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BC035044E0CXF8 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
BC035044E0CXF8 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BC035044E0CXF8 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
BC035044E0CXF8 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.76□□□□□ -0.37
BC035044E0CXF8 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC12.76□□□□□ -0.37
BC035044E0CXF8 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BC035044E0CXF8 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms