Protein–RNA interactions for Protein: D3Z3K2

Ccnb1ip1, E3 ubiquitin-protein ligase CCNB1IP1, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnb1ip1D3Z3K2 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccnb1ip1D3Z3K2 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccnb1ip1D3Z3K2 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccnb1ip1D3Z3K2 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccnb1ip1D3Z3K2 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccnb1ip1D3Z3K2 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccnb1ip1D3Z3K2 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ccnb1ip1D3Z3K2 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccnb1ip1D3Z3K2 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccnb1ip1D3Z3K2 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccnb1ip1D3Z3K2 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccnb1ip1D3Z3K2 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccnb1ip1D3Z3K2 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ccnb1ip1D3Z3K2 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccnb1ip1D3Z3K2 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccnb1ip1D3Z3K2 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccnb1ip1D3Z3K2 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.63□□□□□ -0.23
Ccnb1ip1D3Z3K2 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Ccnb1ip1D3Z3K2 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Ccnb1ip1D3Z3K2 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccnb1ip1D3Z3K2 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccnb1ip1D3Z3K2 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccnb1ip1D3Z3K2 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccnb1ip1D3Z3K2 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccnb1ip1D3Z3K2 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccnb1ip1D3Z3K2 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Ccnb1ip1D3Z3K2 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccnb1ip1D3Z3K2 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccnb1ip1D3Z3K2 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccnb1ip1D3Z3K2 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccnb1ip1D3Z3K2 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.63□□□□□ -0.23
Ccnb1ip1D3Z3K2 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccnb1ip1D3Z3K2 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccnb1ip1D3Z3K2 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccnb1ip1D3Z3K2 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccnb1ip1D3Z3K2 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Ccnb1ip1D3Z3K2 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccnb1ip1D3Z3K2 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccnb1ip1D3Z3K2 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
Ccnb1ip1D3Z3K2 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccnb1ip1D3Z3K2 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccnb1ip1D3Z3K2 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccnb1ip1D3Z3K2 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccnb1ip1D3Z3K2 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccnb1ip1D3Z3K2 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccnb1ip1D3Z3K2 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Ccnb1ip1D3Z3K2 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccnb1ip1D3Z3K2 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.62□□□□□ -0.23
Ccnb1ip1D3Z3K2 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccnb1ip1D3Z3K2 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Ccnb1ip1D3Z3K2 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccnb1ip1D3Z3K2 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Ccnb1ip1D3Z3K2 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccnb1ip1D3Z3K2 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccnb1ip1D3Z3K2 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ccnb1ip1D3Z3K2 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccnb1ip1D3Z3K2 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC13.62□□□□□ -0.23
Ccnb1ip1D3Z3K2 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC13.62□□□□□ -0.23
Ccnb1ip1D3Z3K2 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccnb1ip1D3Z3K2 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccnb1ip1D3Z3K2 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccnb1ip1D3Z3K2 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.62□□□□□ -0.23
Ccnb1ip1D3Z3K2 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Ccnb1ip1D3Z3K2 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.62□□□□□ -0.23
Ccnb1ip1D3Z3K2 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.62□□□□□ -0.23
Ccnb1ip1D3Z3K2 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccnb1ip1D3Z3K2 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccnb1ip1D3Z3K2 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccnb1ip1D3Z3K2 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccnb1ip1D3Z3K2 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccnb1ip1D3Z3K2 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccnb1ip1D3Z3K2 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccnb1ip1D3Z3K2 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC13.61□□□□□ -0.23
Ccnb1ip1D3Z3K2 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccnb1ip1D3Z3K2 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Ccnb1ip1D3Z3K2 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccnb1ip1D3Z3K2 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.61□□□□□ -0.23
Ccnb1ip1D3Z3K2 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccnb1ip1D3Z3K2 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccnb1ip1D3Z3K2 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccnb1ip1D3Z3K2 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccnb1ip1D3Z3K2 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccnb1ip1D3Z3K2 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccnb1ip1D3Z3K2 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.61□□□□□ -0.23
Ccnb1ip1D3Z3K2 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccnb1ip1D3Z3K2 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Ccnb1ip1D3Z3K2 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ccnb1ip1D3Z3K2 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ccnb1ip1D3Z3K2 Gm14722-201ENSMUST00000118943 689 ntBASIC13.61□□□□□ -0.23
Ccnb1ip1D3Z3K2 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC13.61□□□□□ -0.23
Ccnb1ip1D3Z3K2 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC13.61□□□□□ -0.23
Ccnb1ip1D3Z3K2 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.61□□□□□ -0.23
Ccnb1ip1D3Z3K2 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccnb1ip1D3Z3K2 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Ccnb1ip1D3Z3K2 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccnb1ip1D3Z3K2 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccnb1ip1D3Z3K2 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccnb1ip1D3Z3K2 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccnb1ip1D3Z3K2 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccnb1ip1D3Z3K2 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms