Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm9063-201ENSMUST00000223299 582 ntBASIC13.48□□□□□ -0.25
Shank1D3YZU1 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.48□□□□□ -0.25
Shank1D3YZU1 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Shank1D3YZU1 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shank1D3YZU1 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shank1D3YZU1 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shank1D3YZU1 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shank1D3YZU1 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.48□□□□□ -0.25
Shank1D3YZU1 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shank1D3YZU1 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Shank1D3YZU1 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shank1D3YZU1 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.48□□□□□ -0.25
Shank1D3YZU1 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.48□□□□□ -0.25
Shank1D3YZU1 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shank1D3YZU1 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shank1D3YZU1 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shank1D3YZU1 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shank1D3YZU1 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shank1D3YZU1 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Shank1D3YZU1 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shank1D3YZU1 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.48□□□□□ -0.25
Shank1D3YZU1 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.48□□□□□ -0.25
Shank1D3YZU1 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Shank1D3YZU1 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Shank1D3YZU1 Gm43433-201ENSMUST00000196573 481 ntBASIC13.48□□□□□ -0.25
Shank1D3YZU1 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.48□□□□□ -0.25
Shank1D3YZU1 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shank1D3YZU1 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shank1D3YZU1 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shank1D3YZU1 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.47□□□□□ -0.25
Shank1D3YZU1 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Shank1D3YZU1 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shank1D3YZU1 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Shank1D3YZU1 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shank1D3YZU1 Gm14767-201ENSMUST00000121559 586 ntBASIC13.47□□□□□ -0.25
Shank1D3YZU1 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shank1D3YZU1 Gm18049-201ENSMUST00000208909 581 ntBASIC13.47□□□□□ -0.25
Shank1D3YZU1 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.47□□□□□ -0.25
Shank1D3YZU1 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shank1D3YZU1 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Shank1D3YZU1 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shank1D3YZU1 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
Shank1D3YZU1 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shank1D3YZU1 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
Shank1D3YZU1 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shank1D3YZU1 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Shank1D3YZU1 Syt7-205ENSMUST00000224135 1557 ntBASIC13.47□□□□□ -0.25
Shank1D3YZU1 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shank1D3YZU1 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shank1D3YZU1 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Shank1D3YZU1 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Shank1D3YZU1 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shank1D3YZU1 Gm24694-201ENSMUST00000180054 110 ntBASIC13.47□□□□□ -0.25
Shank1D3YZU1 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Shank1D3YZU1 Gm27663-201ENSMUST00000184839 110 ntBASIC13.47□□□□□ -0.25
Shank1D3YZU1 Gm7775-201ENSMUST00000218871 853 ntBASIC13.47□□□□□ -0.25
Shank1D3YZU1 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shank1D3YZU1 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shank1D3YZU1 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shank1D3YZU1 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shank1D3YZU1 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.46□□□□□ -0.25
Shank1D3YZU1 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Shank1D3YZU1 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shank1D3YZU1 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shank1D3YZU1 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Shank1D3YZU1 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shank1D3YZU1 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
Shank1D3YZU1 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.46□□□□□ -0.25
Shank1D3YZU1 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Shank1D3YZU1 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.46□□□□□ -0.25
Shank1D3YZU1 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.46□□□□□ -0.25
Shank1D3YZU1 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.46□□□□□ -0.25
Shank1D3YZU1 Gm27533-201ENSMUST00000183800 152 ntBASIC13.46□□□□□ -0.25
Shank1D3YZU1 Gm6218-201ENSMUST00000219812 628 ntBASIC13.46□□□□□ -0.25
Shank1D3YZU1 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shank1D3YZU1 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Shank1D3YZU1 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Shank1D3YZU1 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Shank1D3YZU1 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Shank1D3YZU1 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.46□□□□□ -0.26
Shank1D3YZU1 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Shank1D3YZU1 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Shank1D3YZU1 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Shank1D3YZU1 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shank1D3YZU1 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.45□□□□□ -0.26
Shank1D3YZU1 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Shank1D3YZU1 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shank1D3YZU1 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Shank1D3YZU1 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Shank1D3YZU1 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.45□□□□□ -0.26
Shank1D3YZU1 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Shank1D3YZU1 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shank1D3YZU1 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.45□□□□□ -0.26
Shank1D3YZU1 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Shank1D3YZU1 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Shank1D3YZU1 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shank1D3YZU1 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shank1D3YZU1 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shank1D3YZU1 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shank1D3YZU1 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms