Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm11127A7VMS2 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm11127A7VMS2 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm11127A7VMS2 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm11127A7VMS2 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Gm11127A7VMS2 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.37□□□□□ -0.27
Gm11127A7VMS2 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm11127A7VMS2 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm11127A7VMS2 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm11127A7VMS2 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm11127A7VMS2 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm11127A7VMS2 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm11127A7VMS2 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm11127A7VMS2 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm11127A7VMS2 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm11127A7VMS2 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm11127A7VMS2 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm11127A7VMS2 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm11127A7VMS2 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm11127A7VMS2 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm11127A7VMS2 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Gm11127A7VMS2 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm11127A7VMS2 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Gm11127A7VMS2 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Gm11127A7VMS2 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.36□□□□□ -0.27
Gm11127A7VMS2 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm11127A7VMS2 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Gm11127A7VMS2 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm11127A7VMS2 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Gm11127A7VMS2 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm11127A7VMS2 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm11127A7VMS2 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm11127A7VMS2 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm11127A7VMS2 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.36□□□□□ -0.27
Gm11127A7VMS2 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Gm11127A7VMS2 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Gm11127A7VMS2 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Gm11127A7VMS2 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Gm11127A7VMS2 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Gm11127A7VMS2 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Gm11127A7VMS2 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm11127A7VMS2 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Gm11127A7VMS2 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm11127A7VMS2 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Gm11127A7VMS2 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm11127A7VMS2 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Gm11127A7VMS2 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm11127A7VMS2 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm11127A7VMS2 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Gm11127A7VMS2 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm11127A7VMS2 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Gm11127A7VMS2 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm11127A7VMS2 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm11127A7VMS2 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Gm11127A7VMS2 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Gm11127A7VMS2 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Gm11127A7VMS2 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm11127A7VMS2 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm11127A7VMS2 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm11127A7VMS2 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm11127A7VMS2 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm11127A7VMS2 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.35□□□□□ -0.27
Gm11127A7VMS2 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm11127A7VMS2 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Gm11127A7VMS2 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Gm11127A7VMS2 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm11127A7VMS2 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm11127A7VMS2 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm11127A7VMS2 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Gm11127A7VMS2 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.35□□□□□ -0.27
Gm11127A7VMS2 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm11127A7VMS2 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm11127A7VMS2 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm11127A7VMS2 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm11127A7VMS2 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Gm11127A7VMS2 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Gm11127A7VMS2 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Gm11127A7VMS2 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm11127A7VMS2 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gm11127A7VMS2 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Gm11127A7VMS2 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Gm11127A7VMS2 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Gm11127A7VMS2 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Gm11127A7VMS2 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Gm11127A7VMS2 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm11127A7VMS2 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Gm11127A7VMS2 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Gm11127A7VMS2 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm11127A7VMS2 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Gm11127A7VMS2 Mir6404-201ENSMUST00000183699 94 ntBASIC13.34□□□□□ -0.27
Gm11127A7VMS2 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Gm11127A7VMS2 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm11127A7VMS2 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Gm11127A7VMS2 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm11127A7VMS2 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Gm11127A7VMS2 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm11127A7VMS2 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm11127A7VMS2 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm11127A7VMS2 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm11127A7VMS2 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms