Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a5A6H584 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a5A6H584 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC11.26□□□□□ -0.61
Col6a5A6H584 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Col6a5A6H584 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a5A6H584 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC11.26□□□□□ -0.61
Col6a5A6H584 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a5A6H584 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Col6a5A6H584 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC11.26□□□□□ -0.61
Col6a5A6H584 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a5A6H584 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC11.26□□□□□ -0.61
Col6a5A6H584 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.26□□□□□ -0.61
Col6a5A6H584 Gm14722-201ENSMUST00000118943 689 ntBASIC11.26□□□□□ -0.61
Col6a5A6H584 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC11.26□□□□□ -0.61
Col6a5A6H584 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Col6a5A6H584 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a5A6H584 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC11.26□□□□□ -0.61
Col6a5A6H584 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC11.26□□□□□ -0.61
Col6a5A6H584 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.26□□□□□ -0.61
Col6a5A6H584 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a5A6H584 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.26□□□□□ -0.61
Col6a5A6H584 Gm45930-201ENSMUST00000221330 292 ntBASIC11.26□□□□□ -0.61
Col6a5A6H584 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a5A6H584 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a5A6H584 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Col6a5A6H584 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC11.26□□□□□ -0.61
Col6a5A6H584 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a5A6H584 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a5A6H584 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a5A6H584 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a5A6H584 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a5A6H584 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a5A6H584 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a5A6H584 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a5A6H584 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
Col6a5A6H584 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Col6a5A6H584 Gm28911-201ENSMUST00000188837 117 ntBASIC11.25□□□□□ -0.61
Col6a5A6H584 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a5A6H584 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.25□□□□□ -0.61
Col6a5A6H584 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Col6a5A6H584 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a5A6H584 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a5A6H584 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a5A6H584 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a5A6H584 Gm43289-201ENSMUST00000200537 1475 ntBASIC11.25□□□□□ -0.61
Col6a5A6H584 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a5A6H584 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a5A6H584 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a5A6H584 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a5A6H584 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Col6a5A6H584 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a5A6H584 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Col6a5A6H584 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a5A6H584 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Col6a5A6H584 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.25□□□□□ -0.61
Col6a5A6H584 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
Col6a5A6H584 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Col6a5A6H584 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a5A6H584 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.25□□□□□ -0.61
Col6a5A6H584 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a5A6H584 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.25□□□□□ -0.61
Col6a5A6H584 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Col6a5A6H584 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a5A6H584 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a5A6H584 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Col6a5A6H584 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Col6a5A6H584 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a5A6H584 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a5A6H584 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Col6a5A6H584 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC11.25□□□□□ -0.61
Col6a5A6H584 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC11.25□□□□□ -0.61
Col6a5A6H584 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a5A6H584 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a5A6H584 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Col6a5A6H584 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.25□□□□□ -0.61
Col6a5A6H584 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a5A6H584 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC11.24□□□□□ -0.61
Col6a5A6H584 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a5A6H584 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a5A6H584 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a5A6H584 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a5A6H584 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a5A6H584 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11.24□□□□□ -0.61
Col6a5A6H584 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC11.24□□□□□ -0.61
Col6a5A6H584 Gm18307-201ENSMUST00000206864 949 ntBASIC11.24□□□□□ -0.61
Col6a5A6H584 AC155286.1-201ENSMUST00000218632 448 ntBASIC11.24□□□□□ -0.61
Col6a5A6H584 AC165157.4-201ENSMUST00000220587 139 ntBASIC11.24□□□□□ -0.61
Col6a5A6H584 AC160980.1-201ENSMUST00000224136 970 ntBASIC11.24□□□□□ -0.61
Col6a5A6H584 AC156016.3-201ENSMUST00000228623 344 ntBASIC11.24□□□□□ -0.61
Col6a5A6H584 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a5A6H584 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Col6a5A6H584 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a5A6H584 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Col6a5A6H584 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC11.24□□□□□ -0.61
Col6a5A6H584 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a5A6H584 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.24□□□□□ -0.61
Col6a5A6H584 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.24□□□□□ -0.61
Col6a5A6H584 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a5A6H584 AC131743.5-201ENSMUST00000220775 1618 ntBASIC11.24□□□□□ -0.61
Col6a5A6H584 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms