Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Scn3aA2ASI5 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn3aA2ASI5 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Scn3aA2ASI5 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn3aA2ASI5 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Scn3aA2ASI5 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn3aA2ASI5 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn3aA2ASI5 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Scn3aA2ASI5 Asic1-205ENSMUST00000228185 1818 ntBASIC16.66■□□□□ 0.26
Scn3aA2ASI5 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn3aA2ASI5 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Scn3aA2ASI5 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC16.66■□□□□ 0.26
Scn3aA2ASI5 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Scn3aA2ASI5 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC16.66■□□□□ 0.26
Scn3aA2ASI5 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Scn3aA2ASI5 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Scn3aA2ASI5 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn3aA2ASI5 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn3aA2ASI5 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Scn3aA2ASI5 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Scn3aA2ASI5 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn3aA2ASI5 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scn3aA2ASI5 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scn3aA2ASI5 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn3aA2ASI5 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn3aA2ASI5 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Scn3aA2ASI5 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.65■□□□□ 0.26
Scn3aA2ASI5 Gm14767-201ENSMUST00000121559 586 ntBASIC16.65■□□□□ 0.26
Scn3aA2ASI5 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scn3aA2ASI5 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC16.65■□□□□ 0.26
Scn3aA2ASI5 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC16.65■□□□□ 0.26
Scn3aA2ASI5 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC16.65■□□□□ 0.26
Scn3aA2ASI5 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn3aA2ASI5 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scn3aA2ASI5 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn3aA2ASI5 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.65■□□□□ 0.26
Scn3aA2ASI5 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn3aA2ASI5 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn3aA2ASI5 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
Scn3aA2ASI5 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn3aA2ASI5 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scn3aA2ASI5 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn3aA2ASI5 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn3aA2ASI5 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn3aA2ASI5 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn3aA2ASI5 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn3aA2ASI5 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn3aA2ASI5 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn3aA2ASI5 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn3aA2ASI5 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn3aA2ASI5 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn3aA2ASI5 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Scn3aA2ASI5 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn3aA2ASI5 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn3aA2ASI5 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
Scn3aA2ASI5 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Scn3aA2ASI5 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC16.64■□□□□ 0.26
Scn3aA2ASI5 Shd-206ENSMUST00000225145 998 ntBASIC16.64■□□□□ 0.26
Scn3aA2ASI5 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
Scn3aA2ASI5 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scn3aA2ASI5 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.64■□□□□ 0.25
Scn3aA2ASI5 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn3aA2ASI5 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn3aA2ASI5 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Scn3aA2ASI5 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scn3aA2ASI5 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Scn3aA2ASI5 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Scn3aA2ASI5 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn3aA2ASI5 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn3aA2ASI5 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn3aA2ASI5 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn3aA2ASI5 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn3aA2ASI5 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn3aA2ASI5 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.64■□□□□ 0.25
Scn3aA2ASI5 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scn3aA2ASI5 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn3aA2ASI5 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
Scn3aA2ASI5 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn3aA2ASI5 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Scn3aA2ASI5 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC16.64■□□□□ 0.25
Scn3aA2ASI5 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC16.64■□□□□ 0.25
Scn3aA2ASI5 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Scn3aA2ASI5 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.64■□□□□ 0.25
Scn3aA2ASI5 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC16.64■□□□□ 0.25
Scn3aA2ASI5 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scn3aA2ASI5 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC16.64■□□□□ 0.25
Scn3aA2ASI5 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn3aA2ASI5 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn3aA2ASI5 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Scn3aA2ASI5 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn3aA2ASI5 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn3aA2ASI5 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn3aA2ASI5 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn3aA2ASI5 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Scn3aA2ASI5 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn3aA2ASI5 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC16.63■□□□□ 0.25
Scn3aA2ASI5 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.63■□□□□ 0.25
Scn3aA2ASI5 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn3aA2ASI5 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scn3aA2ASI5 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms