Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Scn1aA2APX8 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Scn1aA2APX8 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
Scn1aA2APX8 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
Scn1aA2APX8 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.72■□□□□ 0.11
Scn1aA2APX8 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn1aA2APX8 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn1aA2APX8 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn1aA2APX8 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.71■□□□□ 0.11
Scn1aA2APX8 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn1aA2APX8 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Scn1aA2APX8 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn1aA2APX8 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn1aA2APX8 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn1aA2APX8 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn1aA2APX8 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn1aA2APX8 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn1aA2APX8 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn1aA2APX8 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn1aA2APX8 Gm13464-201ENSMUST00000119418 935 ntBASIC15.71■□□□□ 0.11
Scn1aA2APX8 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.71■□□□□ 0.11
Scn1aA2APX8 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Scn1aA2APX8 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn1aA2APX8 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.71■□□□□ 0.11
Scn1aA2APX8 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn1aA2APX8 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn1aA2APX8 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Scn1aA2APX8 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Scn1aA2APX8 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.71■□□□□ 0.1
Scn1aA2APX8 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Scn1aA2APX8 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Scn1aA2APX8 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Scn1aA2APX8 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Scn1aA2APX8 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.71■□□□□ 0.1
Scn1aA2APX8 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Scn1aA2APX8 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Scn1aA2APX8 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn1aA2APX8 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn1aA2APX8 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn1aA2APX8 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn1aA2APX8 Gm7336-201ENSMUST00000107041 1232 ntBASIC15.7■□□□□ 0.1
Scn1aA2APX8 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Scn1aA2APX8 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC15.7■□□□□ 0.1
Scn1aA2APX8 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Scn1aA2APX8 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Scn1aA2APX8 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Scn1aA2APX8 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn1aA2APX8 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Scn1aA2APX8 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Scn1aA2APX8 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn1aA2APX8 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn1aA2APX8 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn1aA2APX8 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn1aA2APX8 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn1aA2APX8 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn1aA2APX8 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Scn1aA2APX8 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Scn1aA2APX8 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn1aA2APX8 Gm38294-201ENSMUST00000192831 381 ntBASIC15.7■□□□□ 0.1
Scn1aA2APX8 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.7■□□□□ 0.1
Scn1aA2APX8 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.7■□□□□ 0.1
Scn1aA2APX8 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn1aA2APX8 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn1aA2APX8 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn1aA2APX8 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Scn1aA2APX8 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn1aA2APX8 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn1aA2APX8 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn1aA2APX8 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC15.69■□□□□ 0.1
Scn1aA2APX8 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC15.69■□□□□ 0.1
Scn1aA2APX8 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Scn1aA2APX8 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.69■□□□□ 0.1
Scn1aA2APX8 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.69■□□□□ 0.1
Scn1aA2APX8 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn1aA2APX8 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn1aA2APX8 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn1aA2APX8 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn1aA2APX8 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Scn1aA2APX8 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn1aA2APX8 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.69■□□□□ 0.1
Scn1aA2APX8 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Scn1aA2APX8 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn1aA2APX8 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
Scn1aA2APX8 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn1aA2APX8 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn1aA2APX8 AC154621.1-201ENSMUST00000226155 1119 ntBASIC15.68■□□□□ 0.1
Scn1aA2APX8 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn1aA2APX8 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn1aA2APX8 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn1aA2APX8 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.68■□□□□ 0.1
Scn1aA2APX8 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn1aA2APX8 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Scn1aA2APX8 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.68■□□□□ 0.1
Scn1aA2APX8 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn1aA2APX8 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.68■□□□□ 0.1
Scn1aA2APX8 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Scn1aA2APX8 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn1aA2APX8 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn1aA2APX8 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Scn1aA2APX8 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms