Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav12-1A0N8R1 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav12-1A0N8R1 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav12-1A0N8R1 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav12-1A0N8R1 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav12-1A0N8R1 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav12-1A0N8R1 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav12-1A0N8R1 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav12-1A0N8R1 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12-1A0N8R1 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12-1A0N8R1 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12-1A0N8R1 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12-1A0N8R1 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12-1A0N8R1 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12-1A0N8R1 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12-1A0N8R1 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12-1A0N8R1 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12-1A0N8R1 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12-1A0N8R1 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12-1A0N8R1 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12-1A0N8R1 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.57□□□□□ -0.4
Trav12-1A0N8R1 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Trav12-1A0N8R1 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12-1A0N8R1 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12-1A0N8R1 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12-1A0N8R1 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12-1A0N8R1 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12-1A0N8R1 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12-1A0N8R1 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav12-1A0N8R1 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12-1A0N8R1 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trav12-1A0N8R1 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12-1A0N8R1 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12-1A0N8R1 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12-1A0N8R1 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12-1A0N8R1 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.57□□□□□ -0.4
Trav12-1A0N8R1 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12-1A0N8R1 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12-1A0N8R1 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav12-1A0N8R1 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.57□□□□□ -0.4
Trav12-1A0N8R1 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.57□□□□□ -0.4
Trav12-1A0N8R1 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12-1A0N8R1 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12-1A0N8R1 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12-1A0N8R1 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trav12-1A0N8R1 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12-1A0N8R1 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12-1A0N8R1 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav12-1A0N8R1 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav12-1A0N8R1 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12-1A0N8R1 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12-1A0N8R1 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12-1A0N8R1 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12-1A0N8R1 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav12-1A0N8R1 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12-1A0N8R1 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12-1A0N8R1 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12-1A0N8R1 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12-1A0N8R1 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav12-1A0N8R1 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav12-1A0N8R1 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav12-1A0N8R1 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav12-1A0N8R1 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trav12-1A0N8R1 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav12-1A0N8R1 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav12-1A0N8R1 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav12-1A0N8R1 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav12-1A0N8R1 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav12-1A0N8R1 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav12-1A0N8R1 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav12-1A0N8R1 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav12-1A0N8R1 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav12-1A0N8R1 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav12-1A0N8R1 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav12-1A0N8R1 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav12-1A0N8R1 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav12-1A0N8R1 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav12-1A0N8R1 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav12-1A0N8R1 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav12-1A0N8R1 Gm12895-201ENSMUST00000122214 226 ntBASIC12.56□□□□□ -0.4
Trav12-1A0N8R1 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav12-1A0N8R1 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC12.56□□□□□ -0.4
Trav12-1A0N8R1 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav12-1A0N8R1 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav12-1A0N8R1 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav12-1A0N8R1 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav12-1A0N8R1 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav12-1A0N8R1 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav12-1A0N8R1 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav12-1A0N8R1 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trav12-1A0N8R1 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.56□□□□□ -0.4
Trav12-1A0N8R1 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav12-1A0N8R1 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav12-1A0N8R1 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav12-1A0N8R1 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav12-1A0N8R1 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav12-1A0N8R1 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav12-1A0N8R1 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.56□□□□□ -0.4
Trav12-1A0N8R1 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trav12-1A0N8R1 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms