Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc112A0AUP1 Gm43509-201ENSMUST00000196551 2594 ntBASIC17.21■□□□□ 0.35
Ccdc112A0AUP1 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc112A0AUP1 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc112A0AUP1 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc112A0AUP1 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc112A0AUP1 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.21■□□□□ 0.35
Ccdc112A0AUP1 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Ccdc112A0AUP1 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc112A0AUP1 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.21■□□□□ 0.35
Ccdc112A0AUP1 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc112A0AUP1 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc112A0AUP1 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc112A0AUP1 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc112A0AUP1 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Ccdc112A0AUP1 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc112A0AUP1 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc112A0AUP1 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc112A0AUP1 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Ccdc112A0AUP1 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc112A0AUP1 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC17.21■□□□□ 0.34
Ccdc112A0AUP1 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ccdc112A0AUP1 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ccdc112A0AUP1 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
Ccdc112A0AUP1 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Ccdc112A0AUP1 Gm38058-201ENSMUST00000194323 4368 ntBASIC17.2■□□□□ 0.34
Ccdc112A0AUP1 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC17.2■□□□□ 0.34
Ccdc112A0AUP1 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC17.2■□□□□ 0.34
Ccdc112A0AUP1 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc112A0AUP1 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Ccdc112A0AUP1 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Ccdc112A0AUP1 Gm11453-201ENSMUST00000117318 1007 ntBASIC17.2■□□□□ 0.34
Ccdc112A0AUP1 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc112A0AUP1 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc112A0AUP1 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.2■□□□□ 0.34
Ccdc112A0AUP1 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc112A0AUP1 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc112A0AUP1 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc112A0AUP1 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc112A0AUP1 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc112A0AUP1 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc112A0AUP1 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc112A0AUP1 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC17.2■□□□□ 0.34
Ccdc112A0AUP1 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Ccdc112A0AUP1 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc112A0AUP1 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc112A0AUP1 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc112A0AUP1 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC17.19■□□□□ 0.34
Ccdc112A0AUP1 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc112A0AUP1 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Ccdc112A0AUP1 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc112A0AUP1 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc112A0AUP1 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc112A0AUP1 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Ccdc112A0AUP1 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Ccdc112A0AUP1 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc112A0AUP1 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc112A0AUP1 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc112A0AUP1 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc112A0AUP1 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc112A0AUP1 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc112A0AUP1 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Ccdc112A0AUP1 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc112A0AUP1 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc112A0AUP1 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Ccdc112A0AUP1 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc112A0AUP1 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc112A0AUP1 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc112A0AUP1 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc112A0AUP1 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC17.18■□□□□ 0.34
Ccdc112A0AUP1 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc112A0AUP1 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Ccdc112A0AUP1 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Ccdc112A0AUP1 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc112A0AUP1 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc112A0AUP1 Gm2308-201ENSMUST00000166539 1004 ntBASIC17.18■□□□□ 0.34
Ccdc112A0AUP1 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Ccdc112A0AUP1 Gm4535-201ENSMUST00000182274 558 ntBASIC17.18■□□□□ 0.34
Ccdc112A0AUP1 Gm18669-201ENSMUST00000216049 778 ntBASIC17.18■□□□□ 0.34
Ccdc112A0AUP1 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc112A0AUP1 Gm10355-201ENSMUST00000097146 517 ntBASIC17.18■□□□□ 0.34
Ccdc112A0AUP1 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.18■□□□□ 0.34
Ccdc112A0AUP1 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc112A0AUP1 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc112A0AUP1 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Ccdc112A0AUP1 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc112A0AUP1 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Ccdc112A0AUP1 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc112A0AUP1 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc112A0AUP1 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Ccdc112A0AUP1 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc112A0AUP1 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc112A0AUP1 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc112A0AUP1 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc112A0AUP1 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc112A0AUP1 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc112A0AUP1 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Ccdc112A0AUP1 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc112A0AUP1 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc112A0AUP1 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms