Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lnp1A0A1B0GSK3 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lnp1A0A1B0GSK3 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lnp1A0A1B0GSK3 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lnp1A0A1B0GSK3 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lnp1A0A1B0GSK3 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lnp1A0A1B0GSK3 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.53□□□□□ -0.4
Lnp1A0A1B0GSK3 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lnp1A0A1B0GSK3 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lnp1A0A1B0GSK3 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.53□□□□□ -0.4
Lnp1A0A1B0GSK3 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lnp1A0A1B0GSK3 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lnp1A0A1B0GSK3 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lnp1A0A1B0GSK3 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lnp1A0A1B0GSK3 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lnp1A0A1B0GSK3 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Lnp1A0A1B0GSK3 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.53□□□□□ -0.4
Lnp1A0A1B0GSK3 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC12.53□□□□□ -0.4
Lnp1A0A1B0GSK3 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC12.53□□□□□ -0.4
Lnp1A0A1B0GSK3 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lnp1A0A1B0GSK3 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lnp1A0A1B0GSK3 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lnp1A0A1B0GSK3 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Lnp1A0A1B0GSK3 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lnp1A0A1B0GSK3 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lnp1A0A1B0GSK3 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lnp1A0A1B0GSK3 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Lnp1A0A1B0GSK3 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Lnp1A0A1B0GSK3 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lnp1A0A1B0GSK3 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lnp1A0A1B0GSK3 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lnp1A0A1B0GSK3 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Lnp1A0A1B0GSK3 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lnp1A0A1B0GSK3 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.53□□□□□ -0.4
Lnp1A0A1B0GSK3 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lnp1A0A1B0GSK3 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.53□□□□□ -0.4
Lnp1A0A1B0GSK3 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lnp1A0A1B0GSK3 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Lnp1A0A1B0GSK3 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Lnp1A0A1B0GSK3 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC12.52□□□□□ -0.4
Lnp1A0A1B0GSK3 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lnp1A0A1B0GSK3 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Lnp1A0A1B0GSK3 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Lnp1A0A1B0GSK3 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lnp1A0A1B0GSK3 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lnp1A0A1B0GSK3 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Lnp1A0A1B0GSK3 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lnp1A0A1B0GSK3 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Lnp1A0A1B0GSK3 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC12.52□□□□□ -0.41
Lnp1A0A1B0GSK3 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lnp1A0A1B0GSK3 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Lnp1A0A1B0GSK3 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.41
Lnp1A0A1B0GSK3 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC12.52□□□□□ -0.41
Lnp1A0A1B0GSK3 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.41
Lnp1A0A1B0GSK3 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.41
Lnp1A0A1B0GSK3 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC12.52□□□□□ -0.41
Lnp1A0A1B0GSK3 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lnp1A0A1B0GSK3 AV026068-213ENSMUST00000223675 1171 ntBASIC12.52□□□□□ -0.41
Lnp1A0A1B0GSK3 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.52□□□□□ -0.41
Lnp1A0A1B0GSK3 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lnp1A0A1B0GSK3 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lnp1A0A1B0GSK3 Gm15590-201ENSMUST00000078419 552 ntBASIC12.52□□□□□ -0.41
Lnp1A0A1B0GSK3 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lnp1A0A1B0GSK3 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lnp1A0A1B0GSK3 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lnp1A0A1B0GSK3 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lnp1A0A1B0GSK3 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lnp1A0A1B0GSK3 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lnp1A0A1B0GSK3 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lnp1A0A1B0GSK3 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lnp1A0A1B0GSK3 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Lnp1A0A1B0GSK3 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lnp1A0A1B0GSK3 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lnp1A0A1B0GSK3 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lnp1A0A1B0GSK3 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lnp1A0A1B0GSK3 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.51□□□□□ -0.41
Lnp1A0A1B0GSK3 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lnp1A0A1B0GSK3 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lnp1A0A1B0GSK3 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lnp1A0A1B0GSK3 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lnp1A0A1B0GSK3 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lnp1A0A1B0GSK3 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lnp1A0A1B0GSK3 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lnp1A0A1B0GSK3 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC12.51□□□□□ -0.41
Lnp1A0A1B0GSK3 Gm4899-201ENSMUST00000178708 719 ntBASIC12.51□□□□□ -0.41
Lnp1A0A1B0GSK3 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Lnp1A0A1B0GSK3 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC12.51□□□□□ -0.41
Lnp1A0A1B0GSK3 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lnp1A0A1B0GSK3 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lnp1A0A1B0GSK3 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lnp1A0A1B0GSK3 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lnp1A0A1B0GSK3 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lnp1A0A1B0GSK3 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lnp1A0A1B0GSK3 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lnp1A0A1B0GSK3 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lnp1A0A1B0GSK3 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Lnp1A0A1B0GSK3 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lnp1A0A1B0GSK3 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lnp1A0A1B0GSK3 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lnp1A0A1B0GSK3 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms