Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Cfap99A0A140LIX9 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cfap99A0A140LIX9 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cfap99A0A140LIX9 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
Cfap99A0A140LIX9 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cfap99A0A140LIX9 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC18■□□□□ 0.47
Cfap99A0A140LIX9 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cfap99A0A140LIX9 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Cfap99A0A140LIX9 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Cfap99A0A140LIX9 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cfap99A0A140LIX9 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cfap99A0A140LIX9 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Cfap99A0A140LIX9 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Cfap99A0A140LIX9 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cfap99A0A140LIX9 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Cfap99A0A140LIX9 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC18■□□□□ 0.47
Cfap99A0A140LIX9 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cfap99A0A140LIX9 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Cfap99A0A140LIX9 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cfap99A0A140LIX9 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cfap99A0A140LIX9 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cfap99A0A140LIX9 Prkcz2-201ENSMUST00000206136 1756 ntBASIC17.99■□□□□ 0.47
Cfap99A0A140LIX9 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cfap99A0A140LIX9 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cfap99A0A140LIX9 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cfap99A0A140LIX9 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cfap99A0A140LIX9 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Cfap99A0A140LIX9 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cfap99A0A140LIX9 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cfap99A0A140LIX9 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Cfap99A0A140LIX9 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cfap99A0A140LIX9 Gm12892-201ENSMUST00000117367 1146 ntBASIC17.99■□□□□ 0.47
Cfap99A0A140LIX9 Gm13365-201ENSMUST00000121188 973 ntBASIC17.99■□□□□ 0.47
Cfap99A0A140LIX9 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC17.99■□□□□ 0.47
Cfap99A0A140LIX9 AA543401-201ENSMUST00000164248 1269 ntBASIC17.99■□□□□ 0.47
Cfap99A0A140LIX9 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cfap99A0A140LIX9 Gm44335-201ENSMUST00000196879 141 ntBASIC17.99■□□□□ 0.47
Cfap99A0A140LIX9 Gm44297-201ENSMUST00000198304 141 ntBASIC17.99■□□□□ 0.47
Cfap99A0A140LIX9 Gm44346-201ENSMUST00000198851 141 ntBASIC17.99■□□□□ 0.47
Cfap99A0A140LIX9 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cfap99A0A140LIX9 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC17.99■□□□□ 0.47
Cfap99A0A140LIX9 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cfap99A0A140LIX9 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cfap99A0A140LIX9 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cfap99A0A140LIX9 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cfap99A0A140LIX9 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cfap99A0A140LIX9 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cfap99A0A140LIX9 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cfap99A0A140LIX9 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cfap99A0A140LIX9 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cfap99A0A140LIX9 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cfap99A0A140LIX9 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cfap99A0A140LIX9 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cfap99A0A140LIX9 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cfap99A0A140LIX9 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cfap99A0A140LIX9 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cfap99A0A140LIX9 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cfap99A0A140LIX9 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC17.98■□□□□ 0.47
Cfap99A0A140LIX9 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC17.98■□□□□ 0.47
Cfap99A0A140LIX9 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cfap99A0A140LIX9 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC17.98■□□□□ 0.47
Cfap99A0A140LIX9 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC17.98■□□□□ 0.47
Cfap99A0A140LIX9 AC158538.2-201ENSMUST00000225455 906 ntBASIC17.98■□□□□ 0.47
Cfap99A0A140LIX9 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cfap99A0A140LIX9 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cfap99A0A140LIX9 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cfap99A0A140LIX9 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Cfap99A0A140LIX9 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cfap99A0A140LIX9 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cfap99A0A140LIX9 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cfap99A0A140LIX9 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cfap99A0A140LIX9 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Cfap99A0A140LIX9 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cfap99A0A140LIX9 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
Cfap99A0A140LIX9 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cfap99A0A140LIX9 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cfap99A0A140LIX9 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cfap99A0A140LIX9 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.98■□□□□ 0.47
Cfap99A0A140LIX9 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cfap99A0A140LIX9 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC17.98■□□□□ 0.47
Cfap99A0A140LIX9 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cfap99A0A140LIX9 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cfap99A0A140LIX9 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cfap99A0A140LIX9 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cfap99A0A140LIX9 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cfap99A0A140LIX9 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cfap99A0A140LIX9 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
Cfap99A0A140LIX9 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.97■□□□□ 0.47
Cfap99A0A140LIX9 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cfap99A0A140LIX9 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cfap99A0A140LIX9 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cfap99A0A140LIX9 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cfap99A0A140LIX9 Gm13332-201ENSMUST00000120451 1398 ntBASIC17.97■□□□□ 0.47
Cfap99A0A140LIX9 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cfap99A0A140LIX9 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC17.97■□□□□ 0.47
Cfap99A0A140LIX9 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.97■□□□□ 0.47
Cfap99A0A140LIX9 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cfap99A0A140LIX9 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cfap99A0A140LIX9 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cfap99A0A140LIX9 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms