Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc194A0A140LIT1 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc194A0A140LIT1 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.98□□□□□ -0.01
Ccdc194A0A140LIT1 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.98□□□□□ -0.01
Ccdc194A0A140LIT1 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc194A0A140LIT1 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc194A0A140LIT1 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc194A0A140LIT1 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Ccdc194A0A140LIT1 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.98□□□□□ -0.01
Ccdc194A0A140LIT1 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc194A0A140LIT1 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.98□□□□□ -0.01
Ccdc194A0A140LIT1 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.98□□□□□ -0.01
Ccdc194A0A140LIT1 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.98□□□□□ -0.01
Ccdc194A0A140LIT1 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Ccdc194A0A140LIT1 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.98□□□□□ -0.01
Ccdc194A0A140LIT1 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc194A0A140LIT1 Gm6296-201ENSMUST00000222599 943 ntBASIC14.98□□□□□ -0.01
Ccdc194A0A140LIT1 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Ccdc194A0A140LIT1 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc194A0A140LIT1 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc194A0A140LIT1 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc194A0A140LIT1 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc194A0A140LIT1 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc194A0A140LIT1 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Ccdc194A0A140LIT1 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.98□□□□□ -0.01
Ccdc194A0A140LIT1 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc194A0A140LIT1 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc194A0A140LIT1 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.97□□□□□ -0.01
Ccdc194A0A140LIT1 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc194A0A140LIT1 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc194A0A140LIT1 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc194A0A140LIT1 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Ccdc194A0A140LIT1 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Ccdc194A0A140LIT1 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc194A0A140LIT1 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc194A0A140LIT1 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc194A0A140LIT1 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.97□□□□□ -0.01
Ccdc194A0A140LIT1 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc194A0A140LIT1 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.97□□□□□ -0.01
Ccdc194A0A140LIT1 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc194A0A140LIT1 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc194A0A140LIT1 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc194A0A140LIT1 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Ccdc194A0A140LIT1 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.97□□□□□ -0.01
Ccdc194A0A140LIT1 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.97□□□□□ -0.01
Ccdc194A0A140LIT1 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Ccdc194A0A140LIT1 Gm4535-201ENSMUST00000182274 558 ntBASIC14.97□□□□□ -0.01
Ccdc194A0A140LIT1 Gm27646-201ENSMUST00000183989 110 ntBASIC14.97□□□□□ -0.01
Ccdc194A0A140LIT1 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc194A0A140LIT1 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.97□□□□□ -0.01
Ccdc194A0A140LIT1 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc194A0A140LIT1 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc194A0A140LIT1 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc194A0A140LIT1 Gm10355-201ENSMUST00000097146 517 ntBASIC14.97□□□□□ -0.01
Ccdc194A0A140LIT1 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
Ccdc194A0A140LIT1 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc194A0A140LIT1 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc194A0A140LIT1 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc194A0A140LIT1 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc194A0A140LIT1 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.97□□□□□ -0.01
Ccdc194A0A140LIT1 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc194A0A140LIT1 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc194A0A140LIT1 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.97□□□□□ -0.01
Ccdc194A0A140LIT1 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc194A0A140LIT1 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc194A0A140LIT1 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc194A0A140LIT1 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc194A0A140LIT1 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Ccdc194A0A140LIT1 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc194A0A140LIT1 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc194A0A140LIT1 Efs-202ENSMUST00000227037 2540 ntBASIC14.96□□□□□ -0.01
Ccdc194A0A140LIT1 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc194A0A140LIT1 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Ccdc194A0A140LIT1 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.96□□□□□ -0.01
Ccdc194A0A140LIT1 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc194A0A140LIT1 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc194A0A140LIT1 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.96□□□□□ -0.01
Ccdc194A0A140LIT1 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.96□□□□□ -0.01
Ccdc194A0A140LIT1 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc194A0A140LIT1 Celf4-206ENSMUST00000224553 1729 ntBASIC14.96□□□□□ -0.01
Ccdc194A0A140LIT1 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.96□□□□□ -0.01
Ccdc194A0A140LIT1 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc194A0A140LIT1 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc194A0A140LIT1 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ccdc194A0A140LIT1 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc194A0A140LIT1 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc194A0A140LIT1 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc194A0A140LIT1 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc194A0A140LIT1 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc194A0A140LIT1 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc194A0A140LIT1 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc194A0A140LIT1 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc194A0A140LIT1 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.95□□□□□ -0.02
Ccdc194A0A140LIT1 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc194A0A140LIT1 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc194A0A140LIT1 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
Ccdc194A0A140LIT1 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc194A0A140LIT1 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc194A0A140LIT1 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc194A0A140LIT1 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms