Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv29A0A0G2LB96 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv29A0A0G2LB96 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv29A0A0G2LB96 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trbv29A0A0G2LB96 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.51□□□□□ -0.41
Trbv29A0A0G2LB96 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv29A0A0G2LB96 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Trbv29A0A0G2LB96 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv29A0A0G2LB96 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv29A0A0G2LB96 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv29A0A0G2LB96 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv29A0A0G2LB96 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trbv29A0A0G2LB96 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Trbv29A0A0G2LB96 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv29A0A0G2LB96 Gm15372-201ENSMUST00000120729 834 ntBASIC12.51□□□□□ -0.41
Trbv29A0A0G2LB96 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trbv29A0A0G2LB96 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv29A0A0G2LB96 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv29A0A0G2LB96 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trbv29A0A0G2LB96 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv29A0A0G2LB96 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv29A0A0G2LB96 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv29A0A0G2LB96 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv29A0A0G2LB96 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv29A0A0G2LB96 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv29A0A0G2LB96 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv29A0A0G2LB96 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.51□□□□□ -0.41
Trbv29A0A0G2LB96 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv29A0A0G2LB96 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trbv29A0A0G2LB96 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv29A0A0G2LB96 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv29A0A0G2LB96 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv29A0A0G2LB96 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv29A0A0G2LB96 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv29A0A0G2LB96 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.5□□□□□ -0.41
Trbv29A0A0G2LB96 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv29A0A0G2LB96 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.5□□□□□ -0.41
Trbv29A0A0G2LB96 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv29A0A0G2LB96 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv29A0A0G2LB96 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv29A0A0G2LB96 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv29A0A0G2LB96 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC12.5□□□□□ -0.41
Trbv29A0A0G2LB96 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv29A0A0G2LB96 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv29A0A0G2LB96 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.5□□□□□ -0.41
Trbv29A0A0G2LB96 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC12.5□□□□□ -0.41
Trbv29A0A0G2LB96 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC12.5□□□□□ -0.41
Trbv29A0A0G2LB96 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC12.5□□□□□ -0.41
Trbv29A0A0G2LB96 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Trbv29A0A0G2LB96 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Trbv29A0A0G2LB96 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Trbv29A0A0G2LB96 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.5□□□□□ -0.41
Trbv29A0A0G2LB96 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv29A0A0G2LB96 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC12.5□□□□□ -0.41
Trbv29A0A0G2LB96 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv29A0A0G2LB96 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv29A0A0G2LB96 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv29A0A0G2LB96 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.5□□□□□ -0.41
Trbv29A0A0G2LB96 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trbv29A0A0G2LB96 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv29A0A0G2LB96 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Trbv29A0A0G2LB96 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trbv29A0A0G2LB96 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.5□□□□□ -0.41
Trbv29A0A0G2LB96 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv29A0A0G2LB96 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv29A0A0G2LB96 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv29A0A0G2LB96 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv29A0A0G2LB96 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv29A0A0G2LB96 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv29A0A0G2LB96 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv29A0A0G2LB96 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv29A0A0G2LB96 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trbv29A0A0G2LB96 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv29A0A0G2LB96 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Trbv29A0A0G2LB96 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv29A0A0G2LB96 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv29A0A0G2LB96 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv29A0A0G2LB96 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv29A0A0G2LB96 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv29A0A0G2LB96 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Trbv29A0A0G2LB96 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.49□□□□□ -0.41
Trbv29A0A0G2LB96 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv29A0A0G2LB96 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv29A0A0G2LB96 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trbv29A0A0G2LB96 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.49□□□□□ -0.41
Trbv29A0A0G2LB96 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Trbv29A0A0G2LB96 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv29A0A0G2LB96 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv29A0A0G2LB96 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv29A0A0G2LB96 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv29A0A0G2LB96 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv29A0A0G2LB96 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv29A0A0G2LB96 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv29A0A0G2LB96 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv29A0A0G2LB96 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.49□□□□□ -0.41
Trbv29A0A0G2LB96 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trbv29A0A0G2LB96 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv29A0A0G2LB96 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv29A0A0G2LB96 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trbv29A0A0G2LB96 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms