Protein–RNA interactions for Protein: A0A0B4J1F6

BC053393, cDNA sequence BC053393, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC053393A0A0B4J1F6 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
BC053393A0A0B4J1F6 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
BC053393A0A0B4J1F6 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
BC053393A0A0B4J1F6 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
BC053393A0A0B4J1F6 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
BC053393A0A0B4J1F6 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
BC053393A0A0B4J1F6 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
BC053393A0A0B4J1F6 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
BC053393A0A0B4J1F6 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
BC053393A0A0B4J1F6 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.06□□□□□ -0.48
BC053393A0A0B4J1F6 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.06□□□□□ -0.48
BC053393A0A0B4J1F6 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
BC053393A0A0B4J1F6 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BC053393A0A0B4J1F6 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
BC053393A0A0B4J1F6 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
BC053393A0A0B4J1F6 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
BC053393A0A0B4J1F6 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BC053393A0A0B4J1F6 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BC053393A0A0B4J1F6 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC12.06□□□□□ -0.48
BC053393A0A0B4J1F6 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.06□□□□□ -0.48
BC053393A0A0B4J1F6 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BC053393A0A0B4J1F6 Gm23547-201ENSMUST00000158210 271 ntBASIC12.06□□□□□ -0.48
BC053393A0A0B4J1F6 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BC053393A0A0B4J1F6 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC12.06□□□□□ -0.48
BC053393A0A0B4J1F6 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
BC053393A0A0B4J1F6 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BC053393A0A0B4J1F6 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
BC053393A0A0B4J1F6 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
BC053393A0A0B4J1F6 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BC053393A0A0B4J1F6 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
BC053393A0A0B4J1F6 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
BC053393A0A0B4J1F6 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BC053393A0A0B4J1F6 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
BC053393A0A0B4J1F6 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.06□□□□□ -0.48
BC053393A0A0B4J1F6 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
BC053393A0A0B4J1F6 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BC053393A0A0B4J1F6 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BC053393A0A0B4J1F6 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BC053393A0A0B4J1F6 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
BC053393A0A0B4J1F6 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BC053393A0A0B4J1F6 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
BC053393A0A0B4J1F6 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BC053393A0A0B4J1F6 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
BC053393A0A0B4J1F6 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
BC053393A0A0B4J1F6 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.06□□□□□ -0.48
BC053393A0A0B4J1F6 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BC053393A0A0B4J1F6 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
BC053393A0A0B4J1F6 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.06□□□□□ -0.48
BC053393A0A0B4J1F6 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
BC053393A0A0B4J1F6 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
BC053393A0A0B4J1F6 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
BC053393A0A0B4J1F6 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
BC053393A0A0B4J1F6 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
BC053393A0A0B4J1F6 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.05□□□□□ -0.48
BC053393A0A0B4J1F6 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
BC053393A0A0B4J1F6 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
BC053393A0A0B4J1F6 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
BC053393A0A0B4J1F6 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
BC053393A0A0B4J1F6 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
BC053393A0A0B4J1F6 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.05□□□□□ -0.48
BC053393A0A0B4J1F6 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
BC053393A0A0B4J1F6 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
BC053393A0A0B4J1F6 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
BC053393A0A0B4J1F6 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
BC053393A0A0B4J1F6 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
BC053393A0A0B4J1F6 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
BC053393A0A0B4J1F6 Gm13312-201ENSMUST00000119631 718 ntBASIC12.05□□□□□ -0.48
BC053393A0A0B4J1F6 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
BC053393A0A0B4J1F6 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
BC053393A0A0B4J1F6 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.05□□□□□ -0.48
BC053393A0A0B4J1F6 Gm33142-201ENSMUST00000193913 867 ntBASIC12.05□□□□□ -0.48
BC053393A0A0B4J1F6 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
BC053393A0A0B4J1F6 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
BC053393A0A0B4J1F6 Otx2os1-206ENSMUST00000228153 787 ntBASIC12.05□□□□□ -0.48
BC053393A0A0B4J1F6 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
BC053393A0A0B4J1F6 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
BC053393A0A0B4J1F6 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
BC053393A0A0B4J1F6 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
BC053393A0A0B4J1F6 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
BC053393A0A0B4J1F6 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
BC053393A0A0B4J1F6 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.05□□□□□ -0.48
BC053393A0A0B4J1F6 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
BC053393A0A0B4J1F6 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.05□□□□□ -0.48
BC053393A0A0B4J1F6 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
BC053393A0A0B4J1F6 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
BC053393A0A0B4J1F6 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
BC053393A0A0B4J1F6 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
BC053393A0A0B4J1F6 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
BC053393A0A0B4J1F6 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
BC053393A0A0B4J1F6 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.04□□□□□ -0.48
BC053393A0A0B4J1F6 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BC053393A0A0B4J1F6 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.04□□□□□ -0.48
BC053393A0A0B4J1F6 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
BC053393A0A0B4J1F6 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BC053393A0A0B4J1F6 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BC053393A0A0B4J1F6 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BC053393A0A0B4J1F6 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
BC053393A0A0B4J1F6 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BC053393A0A0B4J1F6 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
BC053393A0A0B4J1F6 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms