Protein–RNA interactions for Protein: A0A0A6YXG2

Ighv1-56, Immunoglobulin heavy variable 1-56 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-56A0A0A6YXG2 Efs-202ENSMUST00000227037 2540 ntBASIC10.14□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC10.14□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Ighv1-56A0A0A6YXG2 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC10.14□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC10.13□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ighv1-56A0A0A6YXG2 AC159649.2-201ENSMUST00000222984 3223 ntBASIC10.13□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC10.13□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC10.13□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC10.13□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC10.13□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC10.13□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Gm27867-201ENSMUST00000184778 125 ntBASIC10.13□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Ighv1-56A0A0A6YXG2 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Ighv1-56A0A0A6YXG2 AC108846.1-201ENSMUST00000214531 513 ntBASIC10.13□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC10.13□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ighv1-56A0A0A6YXG2 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC10.13□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Gm43697-201ENSMUST00000199637 2581 ntBASIC10.13□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ighv1-56A0A0A6YXG2 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC10.13□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Ighv1-56A0A0A6YXG2 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC10.12□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC10.12□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Camk2g-217ENSMUST00000226630 1937 ntBASIC10.12□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC10.12□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC10.12□□□□□ -0.79
Ighv1-56A0A0A6YXG2 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC10.12□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Ighv1-56A0A0A6YXG2 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC10.12□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Otx2os1-206ENSMUST00000228153 787 ntBASIC10.12□□□□□ -0.79
Ighv1-56A0A0A6YXG2 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC10.12□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC10.12□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ighv1-56A0A0A6YXG2 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ighv1-56A0A0A6YXG2 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms