Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6-5A0A075B6B5 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC11.66□□□□□ -0.54
Trav6-5A0A075B6B5 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
Trav6-5A0A075B6B5 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6-5A0A075B6B5 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC11.66□□□□□ -0.54
Trav6-5A0A075B6B5 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC11.66□□□□□ -0.54
Trav6-5A0A075B6B5 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trav6-5A0A075B6B5 Gm7507-201ENSMUST00000183053 1008 ntBASIC11.66□□□□□ -0.54
Trav6-5A0A075B6B5 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC11.66□□□□□ -0.54
Trav6-5A0A075B6B5 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6-5A0A075B6B5 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trav6-5A0A075B6B5 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6-5A0A075B6B5 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6-5A0A075B6B5 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav6-5A0A075B6B5 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6-5A0A075B6B5 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trav6-5A0A075B6B5 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6-5A0A075B6B5 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6-5A0A075B6B5 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
Trav6-5A0A075B6B5 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6-5A0A075B6B5 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6-5A0A075B6B5 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav6-5A0A075B6B5 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC11.65□□□□□ -0.54
Trav6-5A0A075B6B5 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6-5A0A075B6B5 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6-5A0A075B6B5 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
Trav6-5A0A075B6B5 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6-5A0A075B6B5 AC166491.1-201ENSMUST00000227053 2308 ntBASIC11.65□□□□□ -0.54
Trav6-5A0A075B6B5 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6-5A0A075B6B5 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6-5A0A075B6B5 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6-5A0A075B6B5 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav6-5A0A075B6B5 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav6-5A0A075B6B5 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6-5A0A075B6B5 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav6-5A0A075B6B5 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
Trav6-5A0A075B6B5 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6-5A0A075B6B5 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav6-5A0A075B6B5 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC11.65□□□□□ -0.54
Trav6-5A0A075B6B5 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6-5A0A075B6B5 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trav6-5A0A075B6B5 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav6-5A0A075B6B5 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC11.65□□□□□ -0.54
Trav6-5A0A075B6B5 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6-5A0A075B6B5 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6-5A0A075B6B5 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav6-5A0A075B6B5 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6-5A0A075B6B5 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6-5A0A075B6B5 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav6-5A0A075B6B5 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6-5A0A075B6B5 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.65□□□□□ -0.54
Trav6-5A0A075B6B5 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
Trav6-5A0A075B6B5 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.65□□□□□ -0.54
Trav6-5A0A075B6B5 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6-5A0A075B6B5 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6-5A0A075B6B5 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
Trav6-5A0A075B6B5 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
Trav6-5A0A075B6B5 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Trav6-5A0A075B6B5 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav6-5A0A075B6B5 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav6-5A0A075B6B5 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav6-5A0A075B6B5 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Trav6-5A0A075B6B5 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav6-5A0A075B6B5 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.64□□□□□ -0.55
Trav6-5A0A075B6B5 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6-5A0A075B6B5 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6-5A0A075B6B5 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trav6-5A0A075B6B5 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6-5A0A075B6B5 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6-5A0A075B6B5 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trav6-5A0A075B6B5 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6-5A0A075B6B5 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6-5A0A075B6B5 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6-5A0A075B6B5 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6-5A0A075B6B5 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC11.64□□□□□ -0.55
Trav6-5A0A075B6B5 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
Trav6-5A0A075B6B5 Gm15039-201ENSMUST00000118914 875 ntBASIC11.64□□□□□ -0.55
Trav6-5A0A075B6B5 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC11.64□□□□□ -0.55
Trav6-5A0A075B6B5 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav6-5A0A075B6B5 Gm37722-201ENSMUST00000193757 208 ntBASIC11.64□□□□□ -0.55
Trav6-5A0A075B6B5 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC11.64□□□□□ -0.55
Trav6-5A0A075B6B5 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trav6-5A0A075B6B5 Gm19164-201ENSMUST00000210667 640 ntBASIC11.64□□□□□ -0.55
Trav6-5A0A075B6B5 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC11.64□□□□□ -0.55
Trav6-5A0A075B6B5 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC11.64□□□□□ -0.55
Trav6-5A0A075B6B5 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6-5A0A075B6B5 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6-5A0A075B6B5 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6-5A0A075B6B5 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6-5A0A075B6B5 Gm42769-201ENSMUST00000198576 1659 ntBASIC11.64□□□□□ -0.55
Trav6-5A0A075B6B5 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6-5A0A075B6B5 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6-5A0A075B6B5 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6-5A0A075B6B5 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6-5A0A075B6B5 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6-5A0A075B6B5 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6-5A0A075B6B5 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6-5A0A075B6B5 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.64□□□□□ -0.55
Trav6-5A0A075B6B5 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC11.64□□□□□ -0.55
Trav6-5A0A075B6B5 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms