Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 AC084391.1-201ENSMUST00000200651 141 ntBASIC11.6□□□□□ -0.55
Trav6-4A0A075B6B4 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6-4A0A075B6B4 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Trav6-4A0A075B6B4 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6-4A0A075B6B4 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6-4A0A075B6B4 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6-4A0A075B6B4 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6-4A0A075B6B4 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6-4A0A075B6B4 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trav6-4A0A075B6B4 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6-4A0A075B6B4 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6-4A0A075B6B4 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6-4A0A075B6B4 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6-4A0A075B6B4 Gm8242-201ENSMUST00000193029 1420 ntBASIC11.6□□□□□ -0.55
Trav6-4A0A075B6B4 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6-4A0A075B6B4 Gm11873-201ENSMUST00000117877 1304 ntBASIC11.6□□□□□ -0.55
Trav6-4A0A075B6B4 Gm5366-201ENSMUST00000215494 1338 ntBASIC11.6□□□□□ -0.55
Trav6-4A0A075B6B4 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC11.59□□□□□ -0.55
Trav6-4A0A075B6B4 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6-4A0A075B6B4 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6-4A0A075B6B4 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trav6-4A0A075B6B4 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav6-4A0A075B6B4 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6-4A0A075B6B4 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6-4A0A075B6B4 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6-4A0A075B6B4 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6-4A0A075B6B4 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6-4A0A075B6B4 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6-4A0A075B6B4 Gm43935-201ENSMUST00000203569 1050 ntBASIC11.59□□□□□ -0.55
Trav6-4A0A075B6B4 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC11.59□□□□□ -0.55
Trav6-4A0A075B6B4 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC11.59□□□□□ -0.55
Trav6-4A0A075B6B4 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC11.59□□□□□ -0.55
Trav6-4A0A075B6B4 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6-4A0A075B6B4 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6-4A0A075B6B4 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Trav6-4A0A075B6B4 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6-4A0A075B6B4 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6-4A0A075B6B4 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6-4A0A075B6B4 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6-4A0A075B6B4 AC148324.1-201ENSMUST00000219034 4240 ntBASIC11.59□□□□□ -0.55
Trav6-4A0A075B6B4 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6-4A0A075B6B4 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6-4A0A075B6B4 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6-4A0A075B6B4 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trav6-4A0A075B6B4 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Trav6-4A0A075B6B4 BC037039-201ENSMUST00000192003 2205 ntBASIC11.59□□□□□ -0.55
Trav6-4A0A075B6B4 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trav6-4A0A075B6B4 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6-4A0A075B6B4 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6-4A0A075B6B4 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6-4A0A075B6B4 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.55
Trav6-4A0A075B6B4 Gm45212-201ENSMUST00000205831 3403 ntBASIC11.58□□□□□ -0.55
Trav6-4A0A075B6B4 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trav6-4A0A075B6B4 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Trav6-4A0A075B6B4 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trav6-4A0A075B6B4 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6-4A0A075B6B4 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6-4A0A075B6B4 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6-4A0A075B6B4 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Trav6-4A0A075B6B4 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trav6-4A0A075B6B4 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trav6-4A0A075B6B4 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6-4A0A075B6B4 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trav6-4A0A075B6B4 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6-4A0A075B6B4 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6-4A0A075B6B4 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC11.58□□□□□ -0.56
Trav6-4A0A075B6B4 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC11.58□□□□□ -0.56
Trav6-4A0A075B6B4 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trav6-4A0A075B6B4 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6-4A0A075B6B4 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav6-4A0A075B6B4 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6-4A0A075B6B4 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC11.58□□□□□ -0.56
Trav6-4A0A075B6B4 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC11.58□□□□□ -0.56
Trav6-4A0A075B6B4 Gm18246-201ENSMUST00000221023 728 ntBASIC11.58□□□□□ -0.56
Trav6-4A0A075B6B4 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC11.58□□□□□ -0.56
Trav6-4A0A075B6B4 AC154222.1-201ENSMUST00000223882 475 ntBASIC11.58□□□□□ -0.56
Trav6-4A0A075B6B4 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6-4A0A075B6B4 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6-4A0A075B6B4 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6-4A0A075B6B4 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC11.58□□□□□ -0.56
Trav6-4A0A075B6B4 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6-4A0A075B6B4 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trav6-4A0A075B6B4 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6-4A0A075B6B4 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6-4A0A075B6B4 Ksr1-207ENSMUST00000226282 5260 ntBASIC11.58□□□□□ -0.56
Trav6-4A0A075B6B4 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6-4A0A075B6B4 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6-4A0A075B6B4 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trav6-4A0A075B6B4 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6-4A0A075B6B4 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trav6-4A0A075B6B4 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6-4A0A075B6B4 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trav6-4A0A075B6B4 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trav6-4A0A075B6B4 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav6-4A0A075B6B4 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC11.57□□□□□ -0.56
Trav6-4A0A075B6B4 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Trav6-4A0A075B6B4 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6-4A0A075B6B4 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6-4A0A075B6B4 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6-4A0A075B6B4 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms