Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav6d-7A0A075B6B0 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-7A0A075B6B0 Efs-202ENSMUST00000227037 2540 ntBASIC11.65□□□□□ -0.54
Trav6d-7A0A075B6B0 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-7A0A075B6B0 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-7A0A075B6B0 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-7A0A075B6B0 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-7A0A075B6B0 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC11.65□□□□□ -0.54
Trav6d-7A0A075B6B0 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-7A0A075B6B0 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav6d-7A0A075B6B0 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
Trav6d-7A0A075B6B0 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC11.65□□□□□ -0.55
Trav6d-7A0A075B6B0 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Trav6d-7A0A075B6B0 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav6d-7A0A075B6B0 Gm12620-201ENSMUST00000119791 1986 ntBASIC11.65□□□□□ -0.55
Trav6d-7A0A075B6B0 Gm12612-201ENSMUST00000140182 1986 ntBASIC11.65□□□□□ -0.55
Trav6d-7A0A075B6B0 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav6d-7A0A075B6B0 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav6d-7A0A075B6B0 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav6d-7A0A075B6B0 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-7A0A075B6B0 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-7A0A075B6B0 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav6d-7A0A075B6B0 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-7A0A075B6B0 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-7A0A075B6B0 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-7A0A075B6B0 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-7A0A075B6B0 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-7A0A075B6B0 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-7A0A075B6B0 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-7A0A075B6B0 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-7A0A075B6B0 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav6d-7A0A075B6B0 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-7A0A075B6B0 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-7A0A075B6B0 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-7A0A075B6B0 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-7A0A075B6B0 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-7A0A075B6B0 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trav6d-7A0A075B6B0 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-7A0A075B6B0 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-7A0A075B6B0 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-7A0A075B6B0 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-7A0A075B6B0 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav6d-7A0A075B6B0 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trav6d-7A0A075B6B0 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-7A0A075B6B0 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav6d-7A0A075B6B0 Gm9172-201ENSMUST00000212092 954 ntBASIC11.64□□□□□ -0.55
Trav6d-7A0A075B6B0 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-7A0A075B6B0 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trav6d-7A0A075B6B0 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-7A0A075B6B0 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-7A0A075B6B0 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-7A0A075B6B0 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-7A0A075B6B0 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-7A0A075B6B0 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-7A0A075B6B0 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-7A0A075B6B0 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-7A0A075B6B0 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-7A0A075B6B0 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-7A0A075B6B0 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-7A0A075B6B0 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-7A0A075B6B0 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-7A0A075B6B0 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav6d-7A0A075B6B0 Camk2g-217ENSMUST00000226630 1937 ntBASIC11.64□□□□□ -0.55
Trav6d-7A0A075B6B0 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav6d-7A0A075B6B0 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6d-7A0A075B6B0 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6d-7A0A075B6B0 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6d-7A0A075B6B0 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6d-7A0A075B6B0 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trav6d-7A0A075B6B0 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6d-7A0A075B6B0 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6d-7A0A075B6B0 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6d-7A0A075B6B0 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6d-7A0A075B6B0 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trav6d-7A0A075B6B0 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6d-7A0A075B6B0 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC11.63□□□□□ -0.55
Trav6d-7A0A075B6B0 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6d-7A0A075B6B0 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6d-7A0A075B6B0 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trav6d-7A0A075B6B0 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC11.63□□□□□ -0.55
Trav6d-7A0A075B6B0 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6d-7A0A075B6B0 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6d-7A0A075B6B0 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6d-7A0A075B6B0 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6d-7A0A075B6B0 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6d-7A0A075B6B0 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC11.63□□□□□ -0.55
Trav6d-7A0A075B6B0 Gm7862-201ENSMUST00000121461 292 ntBASIC11.63□□□□□ -0.55
Trav6d-7A0A075B6B0 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6d-7A0A075B6B0 Gm12497-201ENSMUST00000138778 237 ntBASIC11.63□□□□□ -0.55
Trav6d-7A0A075B6B0 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6d-7A0A075B6B0 Gm2651-201ENSMUST00000203560 838 ntBASIC11.63□□□□□ -0.55
Trav6d-7A0A075B6B0 Gm7506-201ENSMUST00000207758 815 ntBASIC11.63□□□□□ -0.55
Trav6d-7A0A075B6B0 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC11.63□□□□□ -0.55
Trav6d-7A0A075B6B0 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC11.63□□□□□ -0.55
Trav6d-7A0A075B6B0 Gm6296-201ENSMUST00000222599 943 ntBASIC11.63□□□□□ -0.55
Trav6d-7A0A075B6B0 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6d-7A0A075B6B0 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6d-7A0A075B6B0 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6d-7A0A075B6B0 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
Trav6d-7A0A075B6B0 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms