Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-4A0A075B654 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Trav3-4A0A075B654 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-4A0A075B654 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-4A0A075B654 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-4A0A075B654 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-4A0A075B654 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-4A0A075B654 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-4A0A075B654 Gm21596-201ENSMUST00000178049 1316 ntBASIC10.16□□□□□ -0.78
Trav3-4A0A075B654 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-4A0A075B654 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Trav3-4A0A075B654 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-4A0A075B654 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-4A0A075B654 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Trav3-4A0A075B654 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-4A0A075B654 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-4A0A075B654 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-4A0A075B654 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
Trav3-4A0A075B654 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC10.16□□□□□ -0.78
Trav3-4A0A075B654 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-4A0A075B654 Gm37292-201ENSMUST00000192062 758 ntBASIC10.16□□□□□ -0.78
Trav3-4A0A075B654 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-4A0A075B654 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Trav3-4A0A075B654 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-4A0A075B654 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-4A0A075B654 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-4A0A075B654 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-4A0A075B654 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Trav3-4A0A075B654 Gm42928-201ENSMUST00000197338 3339 ntBASIC10.16□□□□□ -0.78
Trav3-4A0A075B654 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-4A0A075B654 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-4A0A075B654 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-4A0A075B654 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-4A0A075B654 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Trav3-4A0A075B654 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-4A0A075B654 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC10.16□□□□□ -0.78
Trav3-4A0A075B654 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Trav3-4A0A075B654 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-4A0A075B654 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-4A0A075B654 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-4A0A075B654 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-4A0A075B654 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.78
Trav3-4A0A075B654 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-4A0A075B654 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Trav3-4A0A075B654 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-4A0A075B654 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-4A0A075B654 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Trav3-4A0A075B654 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-4A0A075B654 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-4A0A075B654 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-4A0A075B654 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-4A0A075B654 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-4A0A075B654 Gm13158-201ENSMUST00000122007 736 ntBASIC10.15□□□□□ -0.78
Trav3-4A0A075B654 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-4A0A075B654 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Trav3-4A0A075B654 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-4A0A075B654 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-4A0A075B654 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-4A0A075B654 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-4A0A075B654 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-4A0A075B654 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-4A0A075B654 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-4A0A075B654 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-4A0A075B654 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-4A0A075B654 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Trav3-4A0A075B654 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav3-4A0A075B654 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Trav3-4A0A075B654 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.79
Trav3-4A0A075B654 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav3-4A0A075B654 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Trav3-4A0A075B654 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav3-4A0A075B654 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav3-4A0A075B654 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC10.15□□□□□ -0.79
Trav3-4A0A075B654 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav3-4A0A075B654 Gm43134-201ENSMUST00000199434 1886 ntBASIC10.15□□□□□ -0.79
Trav3-4A0A075B654 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav3-4A0A075B654 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Trav3-4A0A075B654 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-4A0A075B654 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Trav3-4A0A075B654 Gm45053-201ENSMUST00000206112 2499 ntBASIC10.14□□□□□ -0.79
Trav3-4A0A075B654 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-4A0A075B654 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms