Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC11.77□□□□□ -0.53
Trav9-1A0A075B601 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Trav9-1A0A075B601 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9-1A0A075B601 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9-1A0A075B601 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9-1A0A075B601 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9-1A0A075B601 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9-1A0A075B601 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9-1A0A075B601 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9-1A0A075B601 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9-1A0A075B601 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9-1A0A075B601 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9-1A0A075B601 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9-1A0A075B601 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9-1A0A075B601 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9-1A0A075B601 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trav9-1A0A075B601 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9-1A0A075B601 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9-1A0A075B601 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9-1A0A075B601 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9-1A0A075B601 Gm5357-201ENSMUST00000212720 1924 ntBASIC11.76□□□□□ -0.53
Trav9-1A0A075B601 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav9-1A0A075B601 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Trav9-1A0A075B601 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9-1A0A075B601 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9-1A0A075B601 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9-1A0A075B601 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9-1A0A075B601 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav9-1A0A075B601 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9-1A0A075B601 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9-1A0A075B601 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9-1A0A075B601 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9-1A0A075B601 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9-1A0A075B601 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9-1A0A075B601 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9-1A0A075B601 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9-1A0A075B601 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav9-1A0A075B601 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Trav9-1A0A075B601 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9-1A0A075B601 Gm8318-201ENSMUST00000182954 872 ntBASIC11.76□□□□□ -0.53
Trav9-1A0A075B601 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9-1A0A075B601 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9-1A0A075B601 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav9-1A0A075B601 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9-1A0A075B601 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9-1A0A075B601 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9-1A0A075B601 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav9-1A0A075B601 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9-1A0A075B601 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9-1A0A075B601 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9-1A0A075B601 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9-1A0A075B601 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9-1A0A075B601 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9-1A0A075B601 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9-1A0A075B601 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav9-1A0A075B601 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9-1A0A075B601 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9-1A0A075B601 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9-1A0A075B601 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9-1A0A075B601 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC11.76□□□□□ -0.53
Trav9-1A0A075B601 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav9-1A0A075B601 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav9-1A0A075B601 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9-1A0A075B601 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav9-1A0A075B601 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9-1A0A075B601 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9-1A0A075B601 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9-1A0A075B601 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav9-1A0A075B601 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9-1A0A075B601 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9-1A0A075B601 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Trav9-1A0A075B601 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav9-1A0A075B601 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9-1A0A075B601 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9-1A0A075B601 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9-1A0A075B601 Gm27646-201ENSMUST00000183989 110 ntBASIC11.75□□□□□ -0.53
Trav9-1A0A075B601 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC11.75□□□□□ -0.53
Trav9-1A0A075B601 Gm18669-201ENSMUST00000216049 778 ntBASIC11.75□□□□□ -0.53
Trav9-1A0A075B601 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Trav9-1A0A075B601 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9-1A0A075B601 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9-1A0A075B601 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9-1A0A075B601 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9-1A0A075B601 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9-1A0A075B601 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav9-1A0A075B601 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9-1A0A075B601 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9-1A0A075B601 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9-1A0A075B601 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9-1A0A075B601 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9-1A0A075B601 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9-1A0A075B601 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9-1A0A075B601 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9-1A0A075B601 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9-1A0A075B601 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9-1A0A075B601 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav9-1A0A075B601 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9-1A0A075B601 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav9-1A0A075B601 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9-1A0A075B601 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 95.9 ms