Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RpgrQ9R0X5 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RpgrQ9R0X5 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RpgrQ9R0X5 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.35■□□□□ 0.05
RpgrQ9R0X5 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RpgrQ9R0X5 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
RpgrQ9R0X5 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RpgrQ9R0X5 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.35■□□□□ 0.05
RpgrQ9R0X5 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
RpgrQ9R0X5 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RpgrQ9R0X5 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RpgrQ9R0X5 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RpgrQ9R0X5 Gm7506-201ENSMUST00000207758 815 ntBASIC15.35■□□□□ 0.05
RpgrQ9R0X5 Gm19164-201ENSMUST00000210667 640 ntBASIC15.35■□□□□ 0.05
RpgrQ9R0X5 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RpgrQ9R0X5 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RpgrQ9R0X5 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RpgrQ9R0X5 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.35■□□□□ 0.05
RpgrQ9R0X5 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
RpgrQ9R0X5 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RpgrQ9R0X5 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
RpgrQ9R0X5 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RpgrQ9R0X5 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
RpgrQ9R0X5 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RpgrQ9R0X5 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RpgrQ9R0X5 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.35■□□□□ 0.05
RpgrQ9R0X5 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RpgrQ9R0X5 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RpgrQ9R0X5 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.35■□□□□ 0.05
RpgrQ9R0X5 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RpgrQ9R0X5 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RpgrQ9R0X5 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RpgrQ9R0X5 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RpgrQ9R0X5 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RpgrQ9R0X5 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
RpgrQ9R0X5 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RpgrQ9R0X5 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RpgrQ9R0X5 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RpgrQ9R0X5 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RpgrQ9R0X5 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
RpgrQ9R0X5 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
RpgrQ9R0X5 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.34■□□□□ 0.05
RpgrQ9R0X5 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
RpgrQ9R0X5 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
RpgrQ9R0X5 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RpgrQ9R0X5 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RpgrQ9R0X5 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.34■□□□□ 0.05
RpgrQ9R0X5 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.34■□□□□ 0.05
RpgrQ9R0X5 Gm34391-201ENSMUST00000203706 907 ntBASIC15.34■□□□□ 0.05
RpgrQ9R0X5 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
RpgrQ9R0X5 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RpgrQ9R0X5 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.34■□□□□ 0.05
RpgrQ9R0X5 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RpgrQ9R0X5 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RpgrQ9R0X5 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
RpgrQ9R0X5 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.34■□□□□ 0.05
RpgrQ9R0X5 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RpgrQ9R0X5 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RpgrQ9R0X5 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RpgrQ9R0X5 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RpgrQ9R0X5 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RpgrQ9R0X5 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RpgrQ9R0X5 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RpgrQ9R0X5 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RpgrQ9R0X5 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
RpgrQ9R0X5 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RpgrQ9R0X5 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RpgrQ9R0X5 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RpgrQ9R0X5 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.33■□□□□ 0.04
RpgrQ9R0X5 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RpgrQ9R0X5 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RpgrQ9R0X5 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RpgrQ9R0X5 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.33■□□□□ 0.04
RpgrQ9R0X5 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.33■□□□□ 0.04
RpgrQ9R0X5 Gm18622-201ENSMUST00000219361 595 ntBASIC15.33■□□□□ 0.04
RpgrQ9R0X5 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.33■□□□□ 0.04
RpgrQ9R0X5 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RpgrQ9R0X5 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RpgrQ9R0X5 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RpgrQ9R0X5 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RpgrQ9R0X5 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RpgrQ9R0X5 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RpgrQ9R0X5 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RpgrQ9R0X5 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RpgrQ9R0X5 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RpgrQ9R0X5 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RpgrQ9R0X5 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RpgrQ9R0X5 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RpgrQ9R0X5 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RpgrQ9R0X5 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RpgrQ9R0X5 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RpgrQ9R0X5 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RpgrQ9R0X5 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.32■□□□□ 0.04
RpgrQ9R0X5 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RpgrQ9R0X5 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RpgrQ9R0X5 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RpgrQ9R0X5 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RpgrQ9R0X5 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RpgrQ9R0X5 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RpgrQ9R0X5 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms