Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Clcf1Q9QZM3 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
Clcf1Q9QZM3 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Clcf1Q9QZM3 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.71□□□□□ -0.21
Clcf1Q9QZM3 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clcf1Q9QZM3 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clcf1Q9QZM3 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Clcf1Q9QZM3 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Clcf1Q9QZM3 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.71□□□□□ -0.21
Clcf1Q9QZM3 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Clcf1Q9QZM3 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.71□□□□□ -0.21
Clcf1Q9QZM3 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clcf1Q9QZM3 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.71□□□□□ -0.21
Clcf1Q9QZM3 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clcf1Q9QZM3 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Clcf1Q9QZM3 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Clcf1Q9QZM3 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Clcf1Q9QZM3 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Clcf1Q9QZM3 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Clcf1Q9QZM3 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Clcf1Q9QZM3 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Clcf1Q9QZM3 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Clcf1Q9QZM3 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clcf1Q9QZM3 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clcf1Q9QZM3 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clcf1Q9QZM3 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Clcf1Q9QZM3 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Clcf1Q9QZM3 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Clcf1Q9QZM3 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clcf1Q9QZM3 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Clcf1Q9QZM3 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clcf1Q9QZM3 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clcf1Q9QZM3 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Clcf1Q9QZM3 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clcf1Q9QZM3 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.7□□□□□ -0.22
Clcf1Q9QZM3 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Clcf1Q9QZM3 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clcf1Q9QZM3 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.7□□□□□ -0.22
Clcf1Q9QZM3 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clcf1Q9QZM3 Gm27300-201ENSMUST00000184085 97 ntBASIC13.7□□□□□ -0.22
Clcf1Q9QZM3 Gm27335-201ENSMUST00000184758 97 ntBASIC13.7□□□□□ -0.22
Clcf1Q9QZM3 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.7□□□□□ -0.22
Clcf1Q9QZM3 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.7□□□□□ -0.22
Clcf1Q9QZM3 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clcf1Q9QZM3 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Clcf1Q9QZM3 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.7□□□□□ -0.22
Clcf1Q9QZM3 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Clcf1Q9QZM3 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clcf1Q9QZM3 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clcf1Q9QZM3 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clcf1Q9QZM3 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC13.7□□□□□ -0.22
Clcf1Q9QZM3 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clcf1Q9QZM3 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Clcf1Q9QZM3 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clcf1Q9QZM3 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clcf1Q9QZM3 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clcf1Q9QZM3 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clcf1Q9QZM3 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clcf1Q9QZM3 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Clcf1Q9QZM3 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Clcf1Q9QZM3 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clcf1Q9QZM3 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clcf1Q9QZM3 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.7□□□□□ -0.22
Clcf1Q9QZM3 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Clcf1Q9QZM3 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.69□□□□□ -0.22
Clcf1Q9QZM3 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Clcf1Q9QZM3 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clcf1Q9QZM3 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Clcf1Q9QZM3 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clcf1Q9QZM3 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Clcf1Q9QZM3 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Clcf1Q9QZM3 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Clcf1Q9QZM3 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Clcf1Q9QZM3 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clcf1Q9QZM3 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Clcf1Q9QZM3 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clcf1Q9QZM3 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Clcf1Q9QZM3 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.69□□□□□ -0.22
Clcf1Q9QZM3 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clcf1Q9QZM3 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.69□□□□□ -0.22
Clcf1Q9QZM3 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.69□□□□□ -0.22
Clcf1Q9QZM3 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clcf1Q9QZM3 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clcf1Q9QZM3 Gm5867-201ENSMUST00000063197 592 ntBASIC13.69□□□□□ -0.22
Clcf1Q9QZM3 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clcf1Q9QZM3 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Clcf1Q9QZM3 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clcf1Q9QZM3 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clcf1Q9QZM3 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clcf1Q9QZM3 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clcf1Q9QZM3 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Clcf1Q9QZM3 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Clcf1Q9QZM3 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clcf1Q9QZM3 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clcf1Q9QZM3 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Clcf1Q9QZM3 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Clcf1Q9QZM3 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.68□□□□□ -0.22
Clcf1Q9QZM3 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.68□□□□□ -0.22
Clcf1Q9QZM3 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clcf1Q9QZM3 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms