Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SrfQ9JM73 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SrfQ9JM73 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.15□□□□□ -0.14
SrfQ9JM73 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SrfQ9JM73 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SrfQ9JM73 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SrfQ9JM73 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.15□□□□□ -0.14
SrfQ9JM73 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SrfQ9JM73 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SrfQ9JM73 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.15□□□□□ -0.14
SrfQ9JM73 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.15□□□□□ -0.14
SrfQ9JM73 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.15□□□□□ -0.14
SrfQ9JM73 Shd-206ENSMUST00000225145 998 ntBASIC14.15□□□□□ -0.14
SrfQ9JM73 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SrfQ9JM73 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SrfQ9JM73 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SrfQ9JM73 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SrfQ9JM73 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SrfQ9JM73 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SrfQ9JM73 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
SrfQ9JM73 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SrfQ9JM73 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SrfQ9JM73 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SrfQ9JM73 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SrfQ9JM73 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SrfQ9JM73 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SrfQ9JM73 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SrfQ9JM73 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
SrfQ9JM73 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.14□□□□□ -0.15
SrfQ9JM73 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SrfQ9JM73 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SrfQ9JM73 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SrfQ9JM73 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SrfQ9JM73 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SrfQ9JM73 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SrfQ9JM73 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SrfQ9JM73 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.14□□□□□ -0.15
SrfQ9JM73 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.14□□□□□ -0.15
SrfQ9JM73 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SrfQ9JM73 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC14.14□□□□□ -0.15
SrfQ9JM73 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SrfQ9JM73 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.14□□□□□ -0.15
SrfQ9JM73 Gm7653-201ENSMUST00000214567 508 ntBASIC14.14□□□□□ -0.15
SrfQ9JM73 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SrfQ9JM73 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
SrfQ9JM73 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SrfQ9JM73 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SrfQ9JM73 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SrfQ9JM73 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SrfQ9JM73 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SrfQ9JM73 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
SrfQ9JM73 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SrfQ9JM73 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SrfQ9JM73 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SrfQ9JM73 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SrfQ9JM73 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SrfQ9JM73 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SrfQ9JM73 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SrfQ9JM73 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
SrfQ9JM73 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.14□□□□□ -0.15
SrfQ9JM73 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.13□□□□□ -0.15
SrfQ9JM73 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SrfQ9JM73 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SrfQ9JM73 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SrfQ9JM73 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SrfQ9JM73 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SrfQ9JM73 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SrfQ9JM73 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SrfQ9JM73 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SrfQ9JM73 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SrfQ9JM73 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SrfQ9JM73 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SrfQ9JM73 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SrfQ9JM73 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.13□□□□□ -0.15
SrfQ9JM73 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SrfQ9JM73 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SrfQ9JM73 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SrfQ9JM73 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
SrfQ9JM73 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SrfQ9JM73 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SrfQ9JM73 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.13□□□□□ -0.15
SrfQ9JM73 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SrfQ9JM73 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SrfQ9JM73 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
SrfQ9JM73 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.13□□□□□ -0.15
SrfQ9JM73 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SrfQ9JM73 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SrfQ9JM73 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SrfQ9JM73 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SrfQ9JM73 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.12□□□□□ -0.15
SrfQ9JM73 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SrfQ9JM73 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SrfQ9JM73 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.12□□□□□ -0.15
SrfQ9JM73 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SrfQ9JM73 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SrfQ9JM73 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SrfQ9JM73 Gm12859-201ENSMUST00000117834 427 ntBASIC14.12□□□□□ -0.15
SrfQ9JM73 Gm12490-201ENSMUST00000120255 560 ntBASIC14.12□□□□□ -0.15
SrfQ9JM73 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
SrfQ9JM73 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms