Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ube4bQ9ES00 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ube4bQ9ES00 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ube4bQ9ES00 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Ube4bQ9ES00 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Ube4bQ9ES00 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
Ube4bQ9ES00 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ube4bQ9ES00 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ube4bQ9ES00 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ube4bQ9ES00 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ube4bQ9ES00 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ube4bQ9ES00 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ube4bQ9ES00 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ube4bQ9ES00 Gm7213-201ENSMUST00000215977 950 ntBASIC14.52□□□□□ -0.09
Ube4bQ9ES00 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ube4bQ9ES00 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ube4bQ9ES00 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ube4bQ9ES00 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ube4bQ9ES00 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ube4bQ9ES00 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.09
Ube4bQ9ES00 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ube4bQ9ES00 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.52□□□□□ -0.09
Ube4bQ9ES00 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ube4bQ9ES00 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ube4bQ9ES00 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ube4bQ9ES00 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ube4bQ9ES00 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ube4bQ9ES00 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ube4bQ9ES00 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ube4bQ9ES00 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ube4bQ9ES00 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ube4bQ9ES00 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ube4bQ9ES00 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ube4bQ9ES00 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ube4bQ9ES00 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ube4bQ9ES00 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ube4bQ9ES00 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.51□□□□□ -0.09
Ube4bQ9ES00 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ube4bQ9ES00 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.51□□□□□ -0.09
Ube4bQ9ES00 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ube4bQ9ES00 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Ube4bQ9ES00 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Ube4bQ9ES00 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ube4bQ9ES00 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ube4bQ9ES00 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ube4bQ9ES00 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ube4bQ9ES00 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ube4bQ9ES00 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Ube4bQ9ES00 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ube4bQ9ES00 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ube4bQ9ES00 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.51□□□□□ -0.09
Ube4bQ9ES00 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ube4bQ9ES00 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ube4bQ9ES00 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ube4bQ9ES00 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.51□□□□□ -0.09
Ube4bQ9ES00 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ube4bQ9ES00 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.51□□□□□ -0.09
Ube4bQ9ES00 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Ube4bQ9ES00 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ube4bQ9ES00 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Ube4bQ9ES00 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Ube4bQ9ES00 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ube4bQ9ES00 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.5□□□□□ -0.09
Ube4bQ9ES00 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ube4bQ9ES00 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ube4bQ9ES00 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ube4bQ9ES00 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ube4bQ9ES00 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ube4bQ9ES00 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ube4bQ9ES00 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Ube4bQ9ES00 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ube4bQ9ES00 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ube4bQ9ES00 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ube4bQ9ES00 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ube4bQ9ES00 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ube4bQ9ES00 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ube4bQ9ES00 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ube4bQ9ES00 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ube4bQ9ES00 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Ube4bQ9ES00 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ube4bQ9ES00 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Ube4bQ9ES00 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
Ube4bQ9ES00 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ube4bQ9ES00 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Ube4bQ9ES00 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ube4bQ9ES00 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ube4bQ9ES00 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.5□□□□□ -0.09
Ube4bQ9ES00 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ube4bQ9ES00 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ube4bQ9ES00 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Ube4bQ9ES00 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ube4bQ9ES00 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Ube4bQ9ES00 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ube4bQ9ES00 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ube4bQ9ES00 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ube4bQ9ES00 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ube4bQ9ES00 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.49□□□□□ -0.09
Ube4bQ9ES00 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.49□□□□□ -0.09
Ube4bQ9ES00 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ube4bQ9ES00 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms