Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chmp5Q9D7S9 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chmp5Q9D7S9 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chmp5Q9D7S9 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp5Q9D7S9 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp5Q9D7S9 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp5Q9D7S9 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp5Q9D7S9 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp5Q9D7S9 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC18.88■□□□□ 0.61
Chmp5Q9D7S9 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.88■□□□□ 0.61
Chmp5Q9D7S9 Gm12497-201ENSMUST00000138778 237 ntBASIC18.88■□□□□ 0.61
Chmp5Q9D7S9 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18.88■□□□□ 0.61
Chmp5Q9D7S9 Gm27867-201ENSMUST00000184778 125 ntBASIC18.88■□□□□ 0.61
Chmp5Q9D7S9 Gm7506-201ENSMUST00000207758 815 ntBASIC18.88■□□□□ 0.61
Chmp5Q9D7S9 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp5Q9D7S9 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp5Q9D7S9 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC18.88■□□□□ 0.61
Chmp5Q9D7S9 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC18.88■□□□□ 0.61
Chmp5Q9D7S9 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp5Q9D7S9 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Chmp5Q9D7S9 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp5Q9D7S9 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp5Q9D7S9 Nupl1-207ENSMUST00000225311 2475 ntBASIC18.88■□□□□ 0.61
Chmp5Q9D7S9 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC18.87■□□□□ 0.61
Chmp5Q9D7S9 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Chmp5Q9D7S9 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
Chmp5Q9D7S9 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp5Q9D7S9 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp5Q9D7S9 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.87■□□□□ 0.61
Chmp5Q9D7S9 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp5Q9D7S9 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp5Q9D7S9 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Chmp5Q9D7S9 Gm6659-201ENSMUST00000174752 547 ntBASIC18.87■□□□□ 0.61
Chmp5Q9D7S9 Gm8318-201ENSMUST00000182954 872 ntBASIC18.87■□□□□ 0.61
Chmp5Q9D7S9 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Chmp5Q9D7S9 Gm45293-201ENSMUST00000209754 1812 ntBASIC18.87■□□□□ 0.61
Chmp5Q9D7S9 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp5Q9D7S9 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp5Q9D7S9 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Chmp5Q9D7S9 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp5Q9D7S9 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp5Q9D7S9 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp5Q9D7S9 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp5Q9D7S9 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Chmp5Q9D7S9 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Chmp5Q9D7S9 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp5Q9D7S9 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp5Q9D7S9 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp5Q9D7S9 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp5Q9D7S9 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp5Q9D7S9 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp5Q9D7S9 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp5Q9D7S9 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp5Q9D7S9 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp5Q9D7S9 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp5Q9D7S9 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp5Q9D7S9 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp5Q9D7S9 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.86■□□□□ 0.61
Chmp5Q9D7S9 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp5Q9D7S9 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp5Q9D7S9 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp5Q9D7S9 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.86■□□□□ 0.61
Chmp5Q9D7S9 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp5Q9D7S9 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Chmp5Q9D7S9 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp5Q9D7S9 AC162938.1-201ENSMUST00000213140 2323 ntBASIC18.86■□□□□ 0.61
Chmp5Q9D7S9 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp5Q9D7S9 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp5Q9D7S9 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp5Q9D7S9 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp5Q9D7S9 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp5Q9D7S9 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Chmp5Q9D7S9 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp5Q9D7S9 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp5Q9D7S9 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp5Q9D7S9 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp5Q9D7S9 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Chmp5Q9D7S9 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp5Q9D7S9 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp5Q9D7S9 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Chmp5Q9D7S9 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp5Q9D7S9 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp5Q9D7S9 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp5Q9D7S9 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Chmp5Q9D7S9 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.85■□□□□ 0.61
Chmp5Q9D7S9 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp5Q9D7S9 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp5Q9D7S9 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp5Q9D7S9 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp5Q9D7S9 AC122024.2-201ENSMUST00000220086 871 ntBASIC18.85■□□□□ 0.61
Chmp5Q9D7S9 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp5Q9D7S9 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp5Q9D7S9 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp5Q9D7S9 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Chmp5Q9D7S9 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp5Q9D7S9 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp5Q9D7S9 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Chmp5Q9D7S9 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp5Q9D7S9 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp5Q9D7S9 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms