Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp4cQ9D7F7 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp4cQ9D7F7 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.05■□□□□ 0.48
Chmp4cQ9D7F7 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC18.05■□□□□ 0.48
Chmp4cQ9D7F7 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp4cQ9D7F7 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp4cQ9D7F7 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Chmp4cQ9D7F7 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp4cQ9D7F7 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp4cQ9D7F7 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Chmp4cQ9D7F7 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp4cQ9D7F7 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Chmp4cQ9D7F7 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp4cQ9D7F7 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC18.05■□□□□ 0.48
Chmp4cQ9D7F7 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.05■□□□□ 0.48
Chmp4cQ9D7F7 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp4cQ9D7F7 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp4cQ9D7F7 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC18.05■□□□□ 0.48
Chmp4cQ9D7F7 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp4cQ9D7F7 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Chmp4cQ9D7F7 Gm10819-201ENSMUST00000099988 561 ntBASIC18.05■□□□□ 0.48
Chmp4cQ9D7F7 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp4cQ9D7F7 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC18.05■□□□□ 0.48
Chmp4cQ9D7F7 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Chmp4cQ9D7F7 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp4cQ9D7F7 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp4cQ9D7F7 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp4cQ9D7F7 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp4cQ9D7F7 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp4cQ9D7F7 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp4cQ9D7F7 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp4cQ9D7F7 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Chmp4cQ9D7F7 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp4cQ9D7F7 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp4cQ9D7F7 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp4cQ9D7F7 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC18.04■□□□□ 0.48
Chmp4cQ9D7F7 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp4cQ9D7F7 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp4cQ9D7F7 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp4cQ9D7F7 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.04■□□□□ 0.48
Chmp4cQ9D7F7 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp4cQ9D7F7 Gm44357-201ENSMUST00000195897 142 ntBASIC18.04■□□□□ 0.48
Chmp4cQ9D7F7 Gm19658-201ENSMUST00000196231 138 ntBASIC18.04■□□□□ 0.48
Chmp4cQ9D7F7 Gm44367-201ENSMUST00000196836 138 ntBASIC18.04■□□□□ 0.48
Chmp4cQ9D7F7 Gm44350-201ENSMUST00000197197 138 ntBASIC18.04■□□□□ 0.48
Chmp4cQ9D7F7 Gm44390-201ENSMUST00000197533 144 ntBASIC18.04■□□□□ 0.48
Chmp4cQ9D7F7 Gm44313-201ENSMUST00000198018 138 ntBASIC18.04■□□□□ 0.48
Chmp4cQ9D7F7 Gm44486-201ENSMUST00000198508 138 ntBASIC18.04■□□□□ 0.48
Chmp4cQ9D7F7 Gm44314-201ENSMUST00000199263 138 ntBASIC18.04■□□□□ 0.48
Chmp4cQ9D7F7 Gm44394-201ENSMUST00000199558 138 ntBASIC18.04■□□□□ 0.48
Chmp4cQ9D7F7 Gm44484-201ENSMUST00000199873 138 ntBASIC18.04■□□□□ 0.48
Chmp4cQ9D7F7 Gm44466-201ENSMUST00000200264 138 ntBASIC18.04■□□□□ 0.48
Chmp4cQ9D7F7 Gm44359-201ENSMUST00000200671 138 ntBASIC18.04■□□□□ 0.48
Chmp4cQ9D7F7 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp4cQ9D7F7 AC093926.2-201ENSMUST00000214468 1228 ntBASIC18.04■□□□□ 0.48
Chmp4cQ9D7F7 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.04■□□□□ 0.48
Chmp4cQ9D7F7 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Chmp4cQ9D7F7 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp4cQ9D7F7 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC18.04■□□□□ 0.48
Chmp4cQ9D7F7 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
Chmp4cQ9D7F7 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Chmp4cQ9D7F7 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp4cQ9D7F7 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Chmp4cQ9D7F7 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp4cQ9D7F7 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp4cQ9D7F7 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp4cQ9D7F7 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Chmp4cQ9D7F7 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp4cQ9D7F7 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp4cQ9D7F7 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
Chmp4cQ9D7F7 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC18.03■□□□□ 0.48
Chmp4cQ9D7F7 Gm8344-201ENSMUST00000119813 856 ntBASIC18.03■□□□□ 0.48
Chmp4cQ9D7F7 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC18.03■□□□□ 0.48
Chmp4cQ9D7F7 Gm27646-201ENSMUST00000183989 110 ntBASIC18.03■□□□□ 0.48
Chmp4cQ9D7F7 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.03■□□□□ 0.48
Chmp4cQ9D7F7 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp4cQ9D7F7 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp4cQ9D7F7 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp4cQ9D7F7 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.03■□□□□ 0.48
Chmp4cQ9D7F7 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp4cQ9D7F7 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp4cQ9D7F7 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp4cQ9D7F7 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp4cQ9D7F7 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp4cQ9D7F7 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp4cQ9D7F7 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp4cQ9D7F7 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp4cQ9D7F7 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp4cQ9D7F7 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chmp4cQ9D7F7 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chmp4cQ9D7F7 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC18.02■□□□□ 0.48
Chmp4cQ9D7F7 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.02■□□□□ 0.48
Chmp4cQ9D7F7 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chmp4cQ9D7F7 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chmp4cQ9D7F7 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chmp4cQ9D7F7 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chmp4cQ9D7F7 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Chmp4cQ9D7F7 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
Chmp4cQ9D7F7 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chmp4cQ9D7F7 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms