Protein–RNA interactions for Protein: Q9D6T1

Tube1, Tubulin epsilon chain, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tube1Q9D6T1 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tube1Q9D6T1 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tube1Q9D6T1 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tube1Q9D6T1 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC16.77■□□□□ 0.28
Tube1Q9D6T1 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tube1Q9D6T1 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tube1Q9D6T1 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tube1Q9D6T1 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tube1Q9D6T1 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tube1Q9D6T1 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tube1Q9D6T1 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tube1Q9D6T1 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tube1Q9D6T1 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tube1Q9D6T1 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Tube1Q9D6T1 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.77■□□□□ 0.27
Tube1Q9D6T1 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tube1Q9D6T1 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.76■□□□□ 0.27
Tube1Q9D6T1 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tube1Q9D6T1 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tube1Q9D6T1 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tube1Q9D6T1 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tube1Q9D6T1 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tube1Q9D6T1 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tube1Q9D6T1 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
Tube1Q9D6T1 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.76■□□□□ 0.27
Tube1Q9D6T1 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tube1Q9D6T1 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tube1Q9D6T1 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.76■□□□□ 0.27
Tube1Q9D6T1 AC151286.1-201ENSMUST00000198489 145 ntBASIC16.76■□□□□ 0.27
Tube1Q9D6T1 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC16.76■□□□□ 0.27
Tube1Q9D6T1 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Tube1Q9D6T1 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Tube1Q9D6T1 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tube1Q9D6T1 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.76■□□□□ 0.27
Tube1Q9D6T1 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tube1Q9D6T1 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tube1Q9D6T1 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tube1Q9D6T1 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tube1Q9D6T1 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tube1Q9D6T1 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.76■□□□□ 0.27
Tube1Q9D6T1 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tube1Q9D6T1 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tube1Q9D6T1 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Tube1Q9D6T1 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.76■□□□□ 0.27
Tube1Q9D6T1 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tube1Q9D6T1 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tube1Q9D6T1 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tube1Q9D6T1 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Tube1Q9D6T1 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tube1Q9D6T1 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tube1Q9D6T1 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Tube1Q9D6T1 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tube1Q9D6T1 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.75■□□□□ 0.27
Tube1Q9D6T1 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Tube1Q9D6T1 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tube1Q9D6T1 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tube1Q9D6T1 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Tube1Q9D6T1 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tube1Q9D6T1 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tube1Q9D6T1 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tube1Q9D6T1 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tube1Q9D6T1 Gm13597-201ENSMUST00000121239 375 ntBASIC16.75■□□□□ 0.27
Tube1Q9D6T1 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tube1Q9D6T1 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Tube1Q9D6T1 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC16.75■□□□□ 0.27
Tube1Q9D6T1 Gm17271-201ENSMUST00000165535 355 ntBASIC16.75■□□□□ 0.27
Tube1Q9D6T1 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Tube1Q9D6T1 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tube1Q9D6T1 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Tube1Q9D6T1 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tube1Q9D6T1 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Tube1Q9D6T1 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Tube1Q9D6T1 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Tube1Q9D6T1 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.75■□□□□ 0.27
Tube1Q9D6T1 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tube1Q9D6T1 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Tube1Q9D6T1 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tube1Q9D6T1 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tube1Q9D6T1 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tube1Q9D6T1 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tube1Q9D6T1 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tube1Q9D6T1 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tube1Q9D6T1 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Tube1Q9D6T1 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Tube1Q9D6T1 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tube1Q9D6T1 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tube1Q9D6T1 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tube1Q9D6T1 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Tube1Q9D6T1 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Tube1Q9D6T1 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Tube1Q9D6T1 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.74■□□□□ 0.27
Tube1Q9D6T1 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tube1Q9D6T1 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tube1Q9D6T1 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tube1Q9D6T1 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Tube1Q9D6T1 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.74■□□□□ 0.27
Tube1Q9D6T1 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.74■□□□□ 0.27
Tube1Q9D6T1 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.74■□□□□ 0.27
Tube1Q9D6T1 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tube1Q9D6T1 Gm15500-202ENSMUST00000071641 1019 ntBASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms