Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC17.92■□□□□ 0.46
Stag1Q9D3E6 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Stag1Q9D3E6 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Stag1Q9D3E6 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Stag1Q9D3E6 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Stag1Q9D3E6 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Stag1Q9D3E6 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC17.92■□□□□ 0.46
Stag1Q9D3E6 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Stag1Q9D3E6 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Stag1Q9D3E6 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Stag1Q9D3E6 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Stag1Q9D3E6 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Stag1Q9D3E6 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Stag1Q9D3E6 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Stag1Q9D3E6 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Stag1Q9D3E6 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Stag1Q9D3E6 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Stag1Q9D3E6 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Stag1Q9D3E6 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Stag1Q9D3E6 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Stag1Q9D3E6 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Stag1Q9D3E6 Gm8597-201ENSMUST00000191525 1109 ntBASIC17.91■□□□□ 0.46
Stag1Q9D3E6 Gm38225-201ENSMUST00000194001 393 ntBASIC17.91■□□□□ 0.46
Stag1Q9D3E6 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Stag1Q9D3E6 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Stag1Q9D3E6 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Stag1Q9D3E6 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Stag1Q9D3E6 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Stag1Q9D3E6 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Stag1Q9D3E6 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Stag1Q9D3E6 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Stag1Q9D3E6 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC17.9■□□□□ 0.46
Stag1Q9D3E6 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Stag1Q9D3E6 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Stag1Q9D3E6 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Stag1Q9D3E6 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Stag1Q9D3E6 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Stag1Q9D3E6 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Stag1Q9D3E6 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Stag1Q9D3E6 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC17.9■□□□□ 0.46
Stag1Q9D3E6 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Stag1Q9D3E6 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC17.9■□□□□ 0.46
Stag1Q9D3E6 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Stag1Q9D3E6 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Stag1Q9D3E6 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Stag1Q9D3E6 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Stag1Q9D3E6 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.9■□□□□ 0.46
Stag1Q9D3E6 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Stag1Q9D3E6 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Stag1Q9D3E6 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Stag1Q9D3E6 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.89■□□□□ 0.46
Stag1Q9D3E6 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.89■□□□□ 0.46
Stag1Q9D3E6 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Stag1Q9D3E6 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.89■□□□□ 0.46
Stag1Q9D3E6 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Stag1Q9D3E6 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Stag1Q9D3E6 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Stag1Q9D3E6 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.89■□□□□ 0.45
Stag1Q9D3E6 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Stag1Q9D3E6 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Stag1Q9D3E6 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Stag1Q9D3E6 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Stag1Q9D3E6 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Stag1Q9D3E6 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC17.89■□□□□ 0.45
Stag1Q9D3E6 Gm27622-201ENSMUST00000183779 60 ntBASIC17.89■□□□□ 0.45
Stag1Q9D3E6 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Stag1Q9D3E6 AC126408.1-201ENSMUST00000225184 523 ntBASIC17.89■□□□□ 0.45
Stag1Q9D3E6 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Stag1Q9D3E6 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Stag1Q9D3E6 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Stag1Q9D3E6 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Stag1Q9D3E6 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Stag1Q9D3E6 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Stag1Q9D3E6 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Stag1Q9D3E6 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Stag1Q9D3E6 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Stag1Q9D3E6 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Stag1Q9D3E6 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Stag1Q9D3E6 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Stag1Q9D3E6 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Stag1Q9D3E6 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Stag1Q9D3E6 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.88■□□□□ 0.45
Stag1Q9D3E6 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.88■□□□□ 0.45
Stag1Q9D3E6 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Stag1Q9D3E6 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Stag1Q9D3E6 Gm15693-201ENSMUST00000120470 637 ntBASIC17.88■□□□□ 0.45
Stag1Q9D3E6 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Stag1Q9D3E6 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC17.88■□□□□ 0.45
Stag1Q9D3E6 Gm27321-201ENSMUST00000185021 205 ntBASIC17.88■□□□□ 0.45
Stag1Q9D3E6 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC17.88■□□□□ 0.45
Stag1Q9D3E6 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Stag1Q9D3E6 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Stag1Q9D3E6 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Stag1Q9D3E6 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Stag1Q9D3E6 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Stag1Q9D3E6 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Stag1Q9D3E6 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Stag1Q9D3E6 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC17.88■□□□□ 0.45
Stag1Q9D3E6 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
Stag1Q9D3E6 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms