Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trim42Q9D2H5 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim42Q9D2H5 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim42Q9D2H5 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim42Q9D2H5 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim42Q9D2H5 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim42Q9D2H5 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim42Q9D2H5 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trim42Q9D2H5 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim42Q9D2H5 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim42Q9D2H5 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim42Q9D2H5 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim42Q9D2H5 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trim42Q9D2H5 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim42Q9D2H5 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trim42Q9D2H5 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trim42Q9D2H5 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim42Q9D2H5 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim42Q9D2H5 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim42Q9D2H5 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Trim42Q9D2H5 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim42Q9D2H5 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Trim42Q9D2H5 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim42Q9D2H5 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.09■□□□□ 0.01
Trim42Q9D2H5 Gm13436-201ENSMUST00000120418 567 ntBASIC15.09■□□□□ 0.01
Trim42Q9D2H5 Gm11355-201ENSMUST00000121120 306 ntBASIC15.09■□□□□ 0.01
Trim42Q9D2H5 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trim42Q9D2H5 Gm45058-201ENSMUST00000205810 766 ntBASIC15.09■□□□□ 0.01
Trim42Q9D2H5 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Trim42Q9D2H5 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim42Q9D2H5 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim42Q9D2H5 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim42Q9D2H5 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim42Q9D2H5 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC15.09■□□□□ 0.01
Trim42Q9D2H5 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trim42Q9D2H5 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim42Q9D2H5 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC15.09■□□□□ 0.01
Trim42Q9D2H5 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim42Q9D2H5 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trim42Q9D2H5 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim42Q9D2H5 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trim42Q9D2H5 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim42Q9D2H5 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim42Q9D2H5 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim42Q9D2H5 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Trim42Q9D2H5 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0.01
Trim42Q9D2H5 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim42Q9D2H5 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim42Q9D2H5 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim42Q9D2H5 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trim42Q9D2H5 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim42Q9D2H5 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.08■□□□□ 0
Trim42Q9D2H5 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim42Q9D2H5 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim42Q9D2H5 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.08■□□□□ 0
Trim42Q9D2H5 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim42Q9D2H5 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.08■□□□□ 0
Trim42Q9D2H5 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim42Q9D2H5 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.08■□□□□ 0
Trim42Q9D2H5 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim42Q9D2H5 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim42Q9D2H5 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim42Q9D2H5 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim42Q9D2H5 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim42Q9D2H5 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trim42Q9D2H5 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim42Q9D2H5 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim42Q9D2H5 Gm9947-201ENSMUST00000067599 2920 ntBASIC15.08■□□□□ 0
Trim42Q9D2H5 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim42Q9D2H5 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Trim42Q9D2H5 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim42Q9D2H5 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trim42Q9D2H5 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trim42Q9D2H5 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim42Q9D2H5 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trim42Q9D2H5 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim42Q9D2H5 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trim42Q9D2H5 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim42Q9D2H5 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trim42Q9D2H5 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim42Q9D2H5 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim42Q9D2H5 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim42Q9D2H5 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim42Q9D2H5 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim42Q9D2H5 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.07■□□□□ 0
Trim42Q9D2H5 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trim42Q9D2H5 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC15.07■□□□□ 0
Trim42Q9D2H5 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Trim42Q9D2H5 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.07■□□□□ 0
Trim42Q9D2H5 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trim42Q9D2H5 Gm37055-201ENSMUST00000191866 133 ntBASIC15.07■□□□□ 0
Trim42Q9D2H5 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim42Q9D2H5 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trim42Q9D2H5 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim42Q9D2H5 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trim42Q9D2H5 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trim42Q9D2H5 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim42Q9D2H5 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim42Q9D2H5 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trim42Q9D2H5 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms