Protein–RNA interactions for Protein: Q9D0F1

Ndc80, Kinetochore protein NDC80 homolog, mousemouse

Known RBP Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc80Q9D0F1 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ndc80Q9D0F1 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Ndc80Q9D0F1 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ndc80Q9D0F1 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ndc80Q9D0F1 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ndc80Q9D0F1 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ndc80Q9D0F1 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ndc80Q9D0F1 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ndc80Q9D0F1 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ndc80Q9D0F1 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Ndc80Q9D0F1 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ndc80Q9D0F1 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Ndc80Q9D0F1 Gm10060-201ENSMUST00000212002 111 ntBASIC15.34■□□□□ 0.05
Ndc80Q9D0F1 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.34■□□□□ 0.05
Ndc80Q9D0F1 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ndc80Q9D0F1 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ndc80Q9D0F1 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Ndc80Q9D0F1 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ndc80Q9D0F1 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ndc80Q9D0F1 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Ndc80Q9D0F1 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ndc80Q9D0F1 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ndc80Q9D0F1 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Ndc80Q9D0F1 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ndc80Q9D0F1 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ndc80Q9D0F1 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ndc80Q9D0F1 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ndc80Q9D0F1 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ndc80Q9D0F1 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ndc80Q9D0F1 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ndc80Q9D0F1 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ndc80Q9D0F1 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ndc80Q9D0F1 Gm6550-201ENSMUST00000187574 993 ntBASIC15.33■□□□□ 0.04
Ndc80Q9D0F1 Gm37153-201ENSMUST00000193637 231 ntBASIC15.33■□□□□ 0.04
Ndc80Q9D0F1 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ndc80Q9D0F1 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.33■□□□□ 0.04
Ndc80Q9D0F1 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ndc80Q9D0F1 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Ndc80Q9D0F1 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ndc80Q9D0F1 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ndc80Q9D0F1 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ndc80Q9D0F1 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ndc80Q9D0F1 Sybu-209ENSMUST00000228639 4113 ntBASIC15.33■□□□□ 0.04
Ndc80Q9D0F1 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.33■□□□□ 0.04
Ndc80Q9D0F1 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ndc80Q9D0F1 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ndc80Q9D0F1 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ndc80Q9D0F1 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Ndc80Q9D0F1 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ndc80Q9D0F1 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.33■□□□□ 0.04
Ndc80Q9D0F1 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ndc80Q9D0F1 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Ndc80Q9D0F1 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndc80Q9D0F1 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ndc80Q9D0F1 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ndc80Q9D0F1 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndc80Q9D0F1 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndc80Q9D0F1 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndc80Q9D0F1 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndc80Q9D0F1 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndc80Q9D0F1 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndc80Q9D0F1 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndc80Q9D0F1 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndc80Q9D0F1 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ndc80Q9D0F1 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ndc80Q9D0F1 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndc80Q9D0F1 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndc80Q9D0F1 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndc80Q9D0F1 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndc80Q9D0F1 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.32■□□□□ 0.04
Ndc80Q9D0F1 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndc80Q9D0F1 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ndc80Q9D0F1 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndc80Q9D0F1 Gm8318-201ENSMUST00000182954 872 ntBASIC15.32■□□□□ 0.04
Ndc80Q9D0F1 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.32■□□□□ 0.04
Ndc80Q9D0F1 Gm18195-201ENSMUST00000207604 706 ntBASIC15.32■□□□□ 0.04
Ndc80Q9D0F1 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndc80Q9D0F1 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndc80Q9D0F1 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.32■□□□□ 0.04
Ndc80Q9D0F1 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ndc80Q9D0F1 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndc80Q9D0F1 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndc80Q9D0F1 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.31■□□□□ 0.04
Ndc80Q9D0F1 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndc80Q9D0F1 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndc80Q9D0F1 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndc80Q9D0F1 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndc80Q9D0F1 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndc80Q9D0F1 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndc80Q9D0F1 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndc80Q9D0F1 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndc80Q9D0F1 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndc80Q9D0F1 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndc80Q9D0F1 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndc80Q9D0F1 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndc80Q9D0F1 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.31■□□□□ 0.04
Ndc80Q9D0F1 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.31■□□□□ 0.04
Ndc80Q9D0F1 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.31■□□□□ 0.04
Ndc80Q9D0F1 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ndc80Q9D0F1 Gm18489-201ENSMUST00000172565 551 ntBASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms