Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim13Q9CYB0 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim13Q9CYB0 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.96□□□□□ -0.17
Trim13Q9CYB0 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim13Q9CYB0 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim13Q9CYB0 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim13Q9CYB0 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trim13Q9CYB0 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim13Q9CYB0 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim13Q9CYB0 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Trim13Q9CYB0 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Trim13Q9CYB0 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim13Q9CYB0 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim13Q9CYB0 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim13Q9CYB0 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim13Q9CYB0 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim13Q9CYB0 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim13Q9CYB0 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim13Q9CYB0 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trim13Q9CYB0 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim13Q9CYB0 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim13Q9CYB0 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim13Q9CYB0 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim13Q9CYB0 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim13Q9CYB0 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trim13Q9CYB0 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim13Q9CYB0 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim13Q9CYB0 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim13Q9CYB0 Gm10013-201ENSMUST00000106074 672 ntBASIC13.95□□□□□ -0.18
Trim13Q9CYB0 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim13Q9CYB0 Gm25406-201ENSMUST00000157599 105 ntBASIC13.95□□□□□ -0.18
Trim13Q9CYB0 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.95□□□□□ -0.18
Trim13Q9CYB0 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.95□□□□□ -0.18
Trim13Q9CYB0 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.95□□□□□ -0.18
Trim13Q9CYB0 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim13Q9CYB0 Gm44487-201ENSMUST00000205145 325 ntBASIC13.95□□□□□ -0.18
Trim13Q9CYB0 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim13Q9CYB0 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim13Q9CYB0 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trim13Q9CYB0 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Trim13Q9CYB0 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim13Q9CYB0 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim13Q9CYB0 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim13Q9CYB0 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim13Q9CYB0 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim13Q9CYB0 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim13Q9CYB0 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim13Q9CYB0 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.94□□□□□ -0.18
Trim13Q9CYB0 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim13Q9CYB0 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim13Q9CYB0 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim13Q9CYB0 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim13Q9CYB0 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Trim13Q9CYB0 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.94□□□□□ -0.18
Trim13Q9CYB0 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim13Q9CYB0 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
Trim13Q9CYB0 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim13Q9CYB0 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim13Q9CYB0 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim13Q9CYB0 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim13Q9CYB0 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim13Q9CYB0 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim13Q9CYB0 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Trim13Q9CYB0 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim13Q9CYB0 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim13Q9CYB0 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim13Q9CYB0 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim13Q9CYB0 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim13Q9CYB0 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim13Q9CYB0 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim13Q9CYB0 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim13Q9CYB0 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim13Q9CYB0 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.94□□□□□ -0.18
Trim13Q9CYB0 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim13Q9CYB0 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim13Q9CYB0 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim13Q9CYB0 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim13Q9CYB0 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim13Q9CYB0 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim13Q9CYB0 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim13Q9CYB0 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim13Q9CYB0 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim13Q9CYB0 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.93□□□□□ -0.18
Trim13Q9CYB0 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim13Q9CYB0 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim13Q9CYB0 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim13Q9CYB0 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.93□□□□□ -0.18
Trim13Q9CYB0 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim13Q9CYB0 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.93□□□□□ -0.18
Trim13Q9CYB0 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim13Q9CYB0 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim13Q9CYB0 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim13Q9CYB0 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim13Q9CYB0 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trim13Q9CYB0 Gm6623-201ENSMUST00000173570 544 ntBASIC13.93□□□□□ -0.18
Trim13Q9CYB0 Gm6659-201ENSMUST00000174752 547 ntBASIC13.93□□□□□ -0.18
Trim13Q9CYB0 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.93□□□□□ -0.18
Trim13Q9CYB0 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim13Q9CYB0 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.93□□□□□ -0.18
Trim13Q9CYB0 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms