Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ssu72Q9CY97 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ssu72Q9CY97 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Ssu72Q9CY97 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ssu72Q9CY97 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ssu72Q9CY97 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ssu72Q9CY97 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ssu72Q9CY97 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ssu72Q9CY97 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ssu72Q9CY97 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ssu72Q9CY97 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.97□□□□□ -0.01
Ssu72Q9CY97 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ssu72Q9CY97 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ssu72Q9CY97 Gm15165-201ENSMUST00000118140 502 ntBASIC14.97□□□□□ -0.01
Ssu72Q9CY97 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ssu72Q9CY97 Gm29518-201ENSMUST00000190858 372 ntBASIC14.97□□□□□ -0.01
Ssu72Q9CY97 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.97□□□□□ -0.01
Ssu72Q9CY97 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ssu72Q9CY97 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ssu72Q9CY97 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ssu72Q9CY97 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ssu72Q9CY97 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ssu72Q9CY97 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ssu72Q9CY97 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ssu72Q9CY97 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Ssu72Q9CY97 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ssu72Q9CY97 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ssu72Q9CY97 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ssu72Q9CY97 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ssu72Q9CY97 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ssu72Q9CY97 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.97□□□□□ -0.01
Ssu72Q9CY97 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ssu72Q9CY97 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
Ssu72Q9CY97 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Ssu72Q9CY97 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Ssu72Q9CY97 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ssu72Q9CY97 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ssu72Q9CY97 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ssu72Q9CY97 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ssu72Q9CY97 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ssu72Q9CY97 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.96□□□□□ -0.01
Ssu72Q9CY97 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ssu72Q9CY97 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ssu72Q9CY97 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.96□□□□□ -0.01
Ssu72Q9CY97 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.96□□□□□ -0.01
Ssu72Q9CY97 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
Ssu72Q9CY97 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
Ssu72Q9CY97 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
Ssu72Q9CY97 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ssu72Q9CY97 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.96□□□□□ -0.01
Ssu72Q9CY97 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.96□□□□□ -0.01
Ssu72Q9CY97 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ssu72Q9CY97 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ssu72Q9CY97 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ssu72Q9CY97 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ssu72Q9CY97 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ssu72Q9CY97 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ssu72Q9CY97 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Ssu72Q9CY97 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ssu72Q9CY97 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Ssu72Q9CY97 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.96□□□□□ -0.02
Ssu72Q9CY97 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ssu72Q9CY97 Grk6-207ENSMUST00000225925 2769 ntBASIC14.96□□□□□ -0.02
Ssu72Q9CY97 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
Ssu72Q9CY97 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Ssu72Q9CY97 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.95□□□□□ -0.02
Ssu72Q9CY97 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ssu72Q9CY97 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ssu72Q9CY97 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ssu72Q9CY97 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ssu72Q9CY97 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ssu72Q9CY97 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ssu72Q9CY97 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ssu72Q9CY97 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ssu72Q9CY97 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.95□□□□□ -0.02
Ssu72Q9CY97 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.95□□□□□ -0.02
Ssu72Q9CY97 Gm25016-201ENSMUST00000158399 131 ntBASIC14.95□□□□□ -0.02
Ssu72Q9CY97 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
Ssu72Q9CY97 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ssu72Q9CY97 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.95□□□□□ -0.02
Ssu72Q9CY97 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ssu72Q9CY97 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.95□□□□□ -0.02
Ssu72Q9CY97 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ssu72Q9CY97 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Ssu72Q9CY97 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Ssu72Q9CY97 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.95□□□□□ -0.02
Ssu72Q9CY97 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ssu72Q9CY97 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ssu72Q9CY97 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Ssu72Q9CY97 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ssu72Q9CY97 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ssu72Q9CY97 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Ssu72Q9CY97 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ssu72Q9CY97 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.94□□□□□ -0.02
Ssu72Q9CY97 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Ssu72Q9CY97 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ssu72Q9CY97 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ssu72Q9CY97 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ssu72Q9CY97 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Ssu72Q9CY97 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms