Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Ssr1Q9CY50 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ssr1Q9CY50 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.4■□□□□ 0.22
Ssr1Q9CY50 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ssr1Q9CY50 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ssr1Q9CY50 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Ssr1Q9CY50 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ssr1Q9CY50 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ssr1Q9CY50 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.22
Ssr1Q9CY50 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Ssr1Q9CY50 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.39■□□□□ 0.22
Ssr1Q9CY50 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Ssr1Q9CY50 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Ssr1Q9CY50 Pcgf5-211ENSMUST00000225920 6443 ntBASIC16.39■□□□□ 0.21
Ssr1Q9CY50 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssr1Q9CY50 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssr1Q9CY50 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssr1Q9CY50 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssr1Q9CY50 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.39■□□□□ 0.21
Ssr1Q9CY50 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssr1Q9CY50 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssr1Q9CY50 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssr1Q9CY50 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssr1Q9CY50 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Ssr1Q9CY50 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.39■□□□□ 0.21
Ssr1Q9CY50 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.39■□□□□ 0.21
Ssr1Q9CY50 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssr1Q9CY50 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.39■□□□□ 0.21
Ssr1Q9CY50 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssr1Q9CY50 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssr1Q9CY50 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssr1Q9CY50 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssr1Q9CY50 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssr1Q9CY50 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssr1Q9CY50 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssr1Q9CY50 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssr1Q9CY50 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.39■□□□□ 0.21
Ssr1Q9CY50 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssr1Q9CY50 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssr1Q9CY50 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssr1Q9CY50 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Ssr1Q9CY50 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Ssr1Q9CY50 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ssr1Q9CY50 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ssr1Q9CY50 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Ssr1Q9CY50 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ssr1Q9CY50 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ssr1Q9CY50 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ssr1Q9CY50 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ssr1Q9CY50 Ankra2-208ENSMUST00000226100 1476 ntBASIC16.38■□□□□ 0.21
Ssr1Q9CY50 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.38■□□□□ 0.21
Ssr1Q9CY50 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Ssr1Q9CY50 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
Ssr1Q9CY50 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.38■□□□□ 0.21
Ssr1Q9CY50 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.38■□□□□ 0.21
Ssr1Q9CY50 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.38■□□□□ 0.21
Ssr1Q9CY50 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.38■□□□□ 0.21
Ssr1Q9CY50 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Ssr1Q9CY50 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ssr1Q9CY50 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ssr1Q9CY50 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ssr1Q9CY50 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Ssr1Q9CY50 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ssr1Q9CY50 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ssr1Q9CY50 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ssr1Q9CY50 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ssr1Q9CY50 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ssr1Q9CY50 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.38■□□□□ 0.21
Ssr1Q9CY50 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ssr1Q9CY50 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.37■□□□□ 0.21
Ssr1Q9CY50 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.37■□□□□ 0.21
Ssr1Q9CY50 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ssr1Q9CY50 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ssr1Q9CY50 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ssr1Q9CY50 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.37■□□□□ 0.21
Ssr1Q9CY50 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ssr1Q9CY50 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Ssr1Q9CY50 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ssr1Q9CY50 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ssr1Q9CY50 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ssr1Q9CY50 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ssr1Q9CY50 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ssr1Q9CY50 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ssr1Q9CY50 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.37■□□□□ 0.21
Ssr1Q9CY50 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Ssr1Q9CY50 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ssr1Q9CY50 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ssr1Q9CY50 Gm16425-201ENSMUST00000118143 3130 ntBASIC16.37■□□□□ 0.21
Ssr1Q9CY50 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ssr1Q9CY50 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ssr1Q9CY50 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ssr1Q9CY50 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Ssr1Q9CY50 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ssr1Q9CY50 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ssr1Q9CY50 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ssr1Q9CY50 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ssr1Q9CY50 Gm4459-201ENSMUST00000118750 468 ntBASIC16.36■□□□□ 0.21
Ssr1Q9CY50 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ssr1Q9CY50 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Ssr1Q9CY50 Gm19164-201ENSMUST00000210667 640 ntBASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms