Protein–RNA interactions for Protein: Q9CXZ1

Ndufs4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, mousemouse

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufs4Q9CXZ1 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ndufs4Q9CXZ1 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.4□□□□□ -0.1
Ndufs4Q9CXZ1 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.4□□□□□ -0.1
Ndufs4Q9CXZ1 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.4□□□□□ -0.1
Ndufs4Q9CXZ1 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.4□□□□□ -0.1
Ndufs4Q9CXZ1 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ndufs4Q9CXZ1 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Ndufs4Q9CXZ1 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ndufs4Q9CXZ1 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ndufs4Q9CXZ1 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ndufs4Q9CXZ1 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ndufs4Q9CXZ1 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ndufs4Q9CXZ1 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ndufs4Q9CXZ1 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.4□□□□□ -0.1
Ndufs4Q9CXZ1 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ndufs4Q9CXZ1 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ndufs4Q9CXZ1 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.39□□□□□ -0.11
Ndufs4Q9CXZ1 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ndufs4Q9CXZ1 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ndufs4Q9CXZ1 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Ndufs4Q9CXZ1 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ndufs4Q9CXZ1 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Ndufs4Q9CXZ1 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
Ndufs4Q9CXZ1 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.39□□□□□ -0.11
Ndufs4Q9CXZ1 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ndufs4Q9CXZ1 Gm6443-201ENSMUST00000203599 874 ntBASIC14.39□□□□□ -0.11
Ndufs4Q9CXZ1 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
Ndufs4Q9CXZ1 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ndufs4Q9CXZ1 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.39□□□□□ -0.11
Ndufs4Q9CXZ1 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ndufs4Q9CXZ1 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ndufs4Q9CXZ1 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.39□□□□□ -0.11
Ndufs4Q9CXZ1 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ndufs4Q9CXZ1 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ndufs4Q9CXZ1 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ndufs4Q9CXZ1 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ndufs4Q9CXZ1 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ndufs4Q9CXZ1 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ndufs4Q9CXZ1 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.39□□□□□ -0.11
Ndufs4Q9CXZ1 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ndufs4Q9CXZ1 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.39□□□□□ -0.11
Ndufs4Q9CXZ1 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ndufs4Q9CXZ1 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ndufs4Q9CXZ1 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.38□□□□□ -0.11
Ndufs4Q9CXZ1 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ndufs4Q9CXZ1 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ndufs4Q9CXZ1 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ndufs4Q9CXZ1 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ndufs4Q9CXZ1 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ndufs4Q9CXZ1 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ndufs4Q9CXZ1 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.38□□□□□ -0.11
Ndufs4Q9CXZ1 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.38□□□□□ -0.11
Ndufs4Q9CXZ1 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ndufs4Q9CXZ1 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ndufs4Q9CXZ1 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ndufs4Q9CXZ1 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ndufs4Q9CXZ1 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ndufs4Q9CXZ1 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ndufs4Q9CXZ1 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ndufs4Q9CXZ1 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Ndufs4Q9CXZ1 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ndufs4Q9CXZ1 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ndufs4Q9CXZ1 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ndufs4Q9CXZ1 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ndufs4Q9CXZ1 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ndufs4Q9CXZ1 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ndufs4Q9CXZ1 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ndufs4Q9CXZ1 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ndufs4Q9CXZ1 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ndufs4Q9CXZ1 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ndufs4Q9CXZ1 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ndufs4Q9CXZ1 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.38□□□□□ -0.11
Ndufs4Q9CXZ1 Celf4-206ENSMUST00000224553 1729 ntBASIC14.38□□□□□ -0.11
Ndufs4Q9CXZ1 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ndufs4Q9CXZ1 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ndufs4Q9CXZ1 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Ndufs4Q9CXZ1 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ndufs4Q9CXZ1 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ndufs4Q9CXZ1 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ndufs4Q9CXZ1 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ndufs4Q9CXZ1 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ndufs4Q9CXZ1 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ndufs4Q9CXZ1 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ndufs4Q9CXZ1 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ndufs4Q9CXZ1 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ndufs4Q9CXZ1 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ndufs4Q9CXZ1 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ndufs4Q9CXZ1 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ndufs4Q9CXZ1 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ndufs4Q9CXZ1 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ndufs4Q9CXZ1 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ndufs4Q9CXZ1 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ndufs4Q9CXZ1 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Ndufs4Q9CXZ1 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.37□□□□□ -0.11
Ndufs4Q9CXZ1 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Ndufs4Q9CXZ1 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.37□□□□□ -0.11
Ndufs4Q9CXZ1 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ndufs4Q9CXZ1 AW822252-206ENSMUST00000208904 237 ntBASIC14.37□□□□□ -0.11
Ndufs4Q9CXZ1 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ndufs4Q9CXZ1 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms