Protein–RNA interactions for Protein: Q9CWX4

Rpusd4, Mitochondrial RNA pseudouridine synthase Rpusd4, mousemouse

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd4Q9CWX4 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpusd4Q9CWX4 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpusd4Q9CWX4 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Rpusd4Q9CWX4 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpusd4Q9CWX4 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpusd4Q9CWX4 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpusd4Q9CWX4 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Rpusd4Q9CWX4 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpusd4Q9CWX4 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC12.8□□□□□ -0.36
Rpusd4Q9CWX4 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpusd4Q9CWX4 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rpusd4Q9CWX4 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC12.8□□□□□ -0.36
Rpusd4Q9CWX4 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.8□□□□□ -0.36
Rpusd4Q9CWX4 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.8□□□□□ -0.36
Rpusd4Q9CWX4 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Rpusd4Q9CWX4 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpusd4Q9CWX4 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpusd4Q9CWX4 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpusd4Q9CWX4 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpusd4Q9CWX4 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpusd4Q9CWX4 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpusd4Q9CWX4 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpusd4Q9CWX4 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.8□□□□□ -0.36
Rpusd4Q9CWX4 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpusd4Q9CWX4 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpusd4Q9CWX4 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpusd4Q9CWX4 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rpusd4Q9CWX4 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.8□□□□□ -0.36
Rpusd4Q9CWX4 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rpusd4Q9CWX4 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Rpusd4Q9CWX4 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpusd4Q9CWX4 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpusd4Q9CWX4 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rpusd4Q9CWX4 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpusd4Q9CWX4 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpusd4Q9CWX4 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.79□□□□□ -0.36
Rpusd4Q9CWX4 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpusd4Q9CWX4 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpusd4Q9CWX4 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpusd4Q9CWX4 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpusd4Q9CWX4 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpusd4Q9CWX4 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpusd4Q9CWX4 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpusd4Q9CWX4 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpusd4Q9CWX4 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Rpusd4Q9CWX4 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12.79□□□□□ -0.36
Rpusd4Q9CWX4 Cmtm5-203ENSMUST00000227441 610 ntBASIC12.79□□□□□ -0.36
Rpusd4Q9CWX4 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC12.79□□□□□ -0.36
Rpusd4Q9CWX4 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpusd4Q9CWX4 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rpusd4Q9CWX4 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rpusd4Q9CWX4 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpusd4Q9CWX4 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpusd4Q9CWX4 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpusd4Q9CWX4 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpusd4Q9CWX4 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.79□□□□□ -0.36
Rpusd4Q9CWX4 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpusd4Q9CWX4 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Rpusd4Q9CWX4 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rpusd4Q9CWX4 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpusd4Q9CWX4 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpusd4Q9CWX4 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpusd4Q9CWX4 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpusd4Q9CWX4 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rpusd4Q9CWX4 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpusd4Q9CWX4 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpusd4Q9CWX4 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Rpusd4Q9CWX4 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.78□□□□□ -0.36
Rpusd4Q9CWX4 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpusd4Q9CWX4 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Rpusd4Q9CWX4 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpusd4Q9CWX4 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Rpusd4Q9CWX4 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.78□□□□□ -0.36
Rpusd4Q9CWX4 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC12.78□□□□□ -0.36
Rpusd4Q9CWX4 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpusd4Q9CWX4 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Rpusd4Q9CWX4 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Rpusd4Q9CWX4 Rps4l-201ENSMUST00000071745 943 ntBASIC12.78□□□□□ -0.36
Rpusd4Q9CWX4 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
Rpusd4Q9CWX4 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpusd4Q9CWX4 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Rpusd4Q9CWX4 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpusd4Q9CWX4 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpusd4Q9CWX4 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.78□□□□□ -0.36
Rpusd4Q9CWX4 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpusd4Q9CWX4 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpusd4Q9CWX4 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpusd4Q9CWX4 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpusd4Q9CWX4 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rpusd4Q9CWX4 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rpusd4Q9CWX4 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpusd4Q9CWX4 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpusd4Q9CWX4 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.78□□□□□ -0.36
Rpusd4Q9CWX4 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Rpusd4Q9CWX4 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpusd4Q9CWX4 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rpusd4Q9CWX4 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rpusd4Q9CWX4 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Rpusd4Q9CWX4 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rpusd4Q9CWX4 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms