Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Cldnd1Q9CQX5 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cldnd1Q9CQX5 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cldnd1Q9CQX5 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cldnd1Q9CQX5 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cldnd1Q9CQX5 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cldnd1Q9CQX5 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Cldnd1Q9CQX5 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cldnd1Q9CQX5 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC15.35■□□□□ 0.05
Cldnd1Q9CQX5 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cldnd1Q9CQX5 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC15.35■□□□□ 0.05
Cldnd1Q9CQX5 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC15.35■□□□□ 0.05
Cldnd1Q9CQX5 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC15.35■□□□□ 0.05
Cldnd1Q9CQX5 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC15.35■□□□□ 0.05
Cldnd1Q9CQX5 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cldnd1Q9CQX5 Gm15823-201ENSMUST00000064305 670 ntBASIC15.35■□□□□ 0.05
Cldnd1Q9CQX5 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.35■□□□□ 0.05
Cldnd1Q9CQX5 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
Cldnd1Q9CQX5 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cldnd1Q9CQX5 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cldnd1Q9CQX5 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cldnd1Q9CQX5 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cldnd1Q9CQX5 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cldnd1Q9CQX5 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Cldnd1Q9CQX5 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cldnd1Q9CQX5 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Cldnd1Q9CQX5 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cldnd1Q9CQX5 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC15.34■□□□□ 0.05
Cldnd1Q9CQX5 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC15.34■□□□□ 0.05
Cldnd1Q9CQX5 Gm15824-201ENSMUST00000119516 955 ntBASIC15.34■□□□□ 0.05
Cldnd1Q9CQX5 Gm13829-201ENSMUST00000119600 138 ntBASIC15.34■□□□□ 0.05
Cldnd1Q9CQX5 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cldnd1Q9CQX5 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Cldnd1Q9CQX5 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC15.34■□□□□ 0.05
Cldnd1Q9CQX5 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cldnd1Q9CQX5 Gm45668-201ENSMUST00000211271 493 ntBASIC15.34■□□□□ 0.05
Cldnd1Q9CQX5 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cldnd1Q9CQX5 AC153962.4-201ENSMUST00000217878 242 ntBASIC15.34■□□□□ 0.05
Cldnd1Q9CQX5 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Cldnd1Q9CQX5 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cldnd1Q9CQX5 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cldnd1Q9CQX5 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cldnd1Q9CQX5 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cldnd1Q9CQX5 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.34■□□□□ 0.05
Cldnd1Q9CQX5 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cldnd1Q9CQX5 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cldnd1Q9CQX5 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.34■□□□□ 0.05
Cldnd1Q9CQX5 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cldnd1Q9CQX5 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Cldnd1Q9CQX5 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cldnd1Q9CQX5 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Cldnd1Q9CQX5 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cldnd1Q9CQX5 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cldnd1Q9CQX5 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cldnd1Q9CQX5 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cldnd1Q9CQX5 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cldnd1Q9CQX5 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.33■□□□□ 0.04
Cldnd1Q9CQX5 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cldnd1Q9CQX5 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cldnd1Q9CQX5 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cldnd1Q9CQX5 Gm22189-201ENSMUST00000103822 86 ntBASIC15.33■□□□□ 0.04
Cldnd1Q9CQX5 Gm15653-201ENSMUST00000119247 907 ntBASIC15.33■□□□□ 0.04
Cldnd1Q9CQX5 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC15.33■□□□□ 0.04
Cldnd1Q9CQX5 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cldnd1Q9CQX5 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC15.33■□□□□ 0.04
Cldnd1Q9CQX5 Gm5479-201ENSMUST00000160578 435 ntBASIC15.33■□□□□ 0.04
Cldnd1Q9CQX5 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cldnd1Q9CQX5 Gm3436-201ENSMUST00000179930 840 ntBASIC15.33■□□□□ 0.04
Cldnd1Q9CQX5 Gm9522-201ENSMUST00000182394 926 ntBASIC15.33■□□□□ 0.04
Cldnd1Q9CQX5 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cldnd1Q9CQX5 Gm37917-201ENSMUST00000194711 392 ntBASIC15.33■□□□□ 0.04
Cldnd1Q9CQX5 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC15.33■□□□□ 0.04
Cldnd1Q9CQX5 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cldnd1Q9CQX5 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cldnd1Q9CQX5 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cldnd1Q9CQX5 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cldnd1Q9CQX5 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cldnd1Q9CQX5 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cldnd1Q9CQX5 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cldnd1Q9CQX5 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cldnd1Q9CQX5 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cldnd1Q9CQX5 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cldnd1Q9CQX5 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Cldnd1Q9CQX5 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cldnd1Q9CQX5 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cldnd1Q9CQX5 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cldnd1Q9CQX5 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cldnd1Q9CQX5 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cldnd1Q9CQX5 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cldnd1Q9CQX5 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
Cldnd1Q9CQX5 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Cldnd1Q9CQX5 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.33■□□□□ 0.04
Cldnd1Q9CQX5 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.32■□□□□ 0.04
Cldnd1Q9CQX5 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cldnd1Q9CQX5 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cldnd1Q9CQX5 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cldnd1Q9CQX5 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cldnd1Q9CQX5 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cldnd1Q9CQX5 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cldnd1Q9CQX5 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms