Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.3□□□□□ -0.44
RTRAFQ9CQE8 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RTRAFQ9CQE8 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RTRAFQ9CQE8 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RTRAFQ9CQE8 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RTRAFQ9CQE8 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RTRAFQ9CQE8 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
RTRAFQ9CQE8 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
RTRAFQ9CQE8 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RTRAFQ9CQE8 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RTRAFQ9CQE8 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RTRAFQ9CQE8 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RTRAFQ9CQE8 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RTRAFQ9CQE8 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RTRAFQ9CQE8 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RTRAFQ9CQE8 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RTRAFQ9CQE8 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RTRAFQ9CQE8 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RTRAFQ9CQE8 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RTRAFQ9CQE8 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
RTRAFQ9CQE8 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RTRAFQ9CQE8 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RTRAFQ9CQE8 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.3□□□□□ -0.44
RTRAFQ9CQE8 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.29□□□□□ -0.44
RTRAFQ9CQE8 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RTRAFQ9CQE8 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RTRAFQ9CQE8 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
RTRAFQ9CQE8 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RTRAFQ9CQE8 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RTRAFQ9CQE8 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RTRAFQ9CQE8 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RTRAFQ9CQE8 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RTRAFQ9CQE8 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RTRAFQ9CQE8 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RTRAFQ9CQE8 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RTRAFQ9CQE8 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RTRAFQ9CQE8 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RTRAFQ9CQE8 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RTRAFQ9CQE8 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RTRAFQ9CQE8 Otx2os1-204ENSMUST00000227221 751 ntBASIC12.29□□□□□ -0.44
RTRAFQ9CQE8 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RTRAFQ9CQE8 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RTRAFQ9CQE8 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RTRAFQ9CQE8 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RTRAFQ9CQE8 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RTRAFQ9CQE8 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RTRAFQ9CQE8 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RTRAFQ9CQE8 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RTRAFQ9CQE8 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
RTRAFQ9CQE8 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RTRAFQ9CQE8 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
RTRAFQ9CQE8 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RTRAFQ9CQE8 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RTRAFQ9CQE8 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RTRAFQ9CQE8 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RTRAFQ9CQE8 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC12.28□□□□□ -0.44
RTRAFQ9CQE8 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC12.28□□□□□ -0.44
RTRAFQ9CQE8 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RTRAFQ9CQE8 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RTRAFQ9CQE8 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
RTRAFQ9CQE8 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RTRAFQ9CQE8 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RTRAFQ9CQE8 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RTRAFQ9CQE8 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
RTRAFQ9CQE8 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RTRAFQ9CQE8 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RTRAFQ9CQE8 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RTRAFQ9CQE8 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.28□□□□□ -0.44
RTRAFQ9CQE8 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
RTRAFQ9CQE8 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RTRAFQ9CQE8 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
RTRAFQ9CQE8 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC12.28□□□□□ -0.44
RTRAFQ9CQE8 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC12.28□□□□□ -0.44
RTRAFQ9CQE8 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC12.28□□□□□ -0.44
RTRAFQ9CQE8 Odf3b-204ENSMUST00000227834 930 ntBASIC12.28□□□□□ -0.44
RTRAFQ9CQE8 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
RTRAFQ9CQE8 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
RTRAFQ9CQE8 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RTRAFQ9CQE8 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.28□□□□□ -0.44
RTRAFQ9CQE8 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RTRAFQ9CQE8 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
RTRAFQ9CQE8 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RTRAFQ9CQE8 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RTRAFQ9CQE8 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC12.28□□□□□ -0.44
RTRAFQ9CQE8 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC12.28□□□□□ -0.44
RTRAFQ9CQE8 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RTRAFQ9CQE8 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
RTRAFQ9CQE8 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.28□□□□□ -0.44
RTRAFQ9CQE8 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.28□□□□□ -0.44
RTRAFQ9CQE8 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RTRAFQ9CQE8 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
RTRAFQ9CQE8 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RTRAFQ9CQE8 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.27□□□□□ -0.44
RTRAFQ9CQE8 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RTRAFQ9CQE8 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RTRAFQ9CQE8 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.44
RTRAFQ9CQE8 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
RTRAFQ9CQE8 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
RTRAFQ9CQE8 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RTRAFQ9CQE8 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms