Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prpf8Q99PV0 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prpf8Q99PV0 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.37□□□□□ -0.43
Prpf8Q99PV0 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prpf8Q99PV0 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Prpf8Q99PV0 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prpf8Q99PV0 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Prpf8Q99PV0 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Prpf8Q99PV0 Gm6973-201ENSMUST00000117080 721 ntBASIC12.37□□□□□ -0.43
Prpf8Q99PV0 Gm16198-201ENSMUST00000118766 670 ntBASIC12.37□□□□□ -0.43
Prpf8Q99PV0 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.37□□□□□ -0.43
Prpf8Q99PV0 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Prpf8Q99PV0 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prpf8Q99PV0 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prpf8Q99PV0 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.37□□□□□ -0.43
Prpf8Q99PV0 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Prpf8Q99PV0 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Prpf8Q99PV0 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prpf8Q99PV0 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prpf8Q99PV0 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Prpf8Q99PV0 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.37□□□□□ -0.43
Prpf8Q99PV0 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Prpf8Q99PV0 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prpf8Q99PV0 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.37□□□□□ -0.43
Prpf8Q99PV0 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prpf8Q99PV0 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prpf8Q99PV0 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.37□□□□□ -0.43
Prpf8Q99PV0 Gm22175-201ENSMUST00000175007 78 ntBASIC12.37□□□□□ -0.43
Prpf8Q99PV0 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Prpf8Q99PV0 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.37□□□□□ -0.43
Prpf8Q99PV0 Gm18057-201ENSMUST00000208220 503 ntBASIC12.37□□□□□ -0.43
Prpf8Q99PV0 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prpf8Q99PV0 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prpf8Q99PV0 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Prpf8Q99PV0 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prpf8Q99PV0 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Prpf8Q99PV0 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prpf8Q99PV0 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.36□□□□□ -0.43
Prpf8Q99PV0 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf8Q99PV0 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf8Q99PV0 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf8Q99PV0 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Prpf8Q99PV0 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf8Q99PV0 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf8Q99PV0 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.36□□□□□ -0.43
Prpf8Q99PV0 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.36□□□□□ -0.43
Prpf8Q99PV0 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf8Q99PV0 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf8Q99PV0 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf8Q99PV0 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf8Q99PV0 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Prpf8Q99PV0 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Prpf8Q99PV0 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Prpf8Q99PV0 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.36□□□□□ -0.43
Prpf8Q99PV0 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.36□□□□□ -0.43
Prpf8Q99PV0 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf8Q99PV0 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.36□□□□□ -0.43
Prpf8Q99PV0 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.36□□□□□ -0.43
Prpf8Q99PV0 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf8Q99PV0 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf8Q99PV0 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Prpf8Q99PV0 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC12.36□□□□□ -0.43
Prpf8Q99PV0 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.36□□□□□ -0.43
Prpf8Q99PV0 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf8Q99PV0 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf8Q99PV0 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf8Q99PV0 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf8Q99PV0 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf8Q99PV0 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.36□□□□□ -0.43
Prpf8Q99PV0 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Prpf8Q99PV0 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf8Q99PV0 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf8Q99PV0 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC12.36□□□□□ -0.43
Prpf8Q99PV0 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf8Q99PV0 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf8Q99PV0 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf8Q99PV0 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf8Q99PV0 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf8Q99PV0 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf8Q99PV0 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC12.36□□□□□ -0.43
Prpf8Q99PV0 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf8Q99PV0 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf8Q99PV0 Gm13223-201ENSMUST00000118609 747 ntBASIC12.36□□□□□ -0.43
Prpf8Q99PV0 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf8Q99PV0 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Prpf8Q99PV0 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf8Q99PV0 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.36□□□□□ -0.43
Prpf8Q99PV0 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.36□□□□□ -0.43
Prpf8Q99PV0 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.36□□□□□ -0.43
Prpf8Q99PV0 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.36□□□□□ -0.43
Prpf8Q99PV0 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Prpf8Q99PV0 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf8Q99PV0 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf8Q99PV0 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf8Q99PV0 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf8Q99PV0 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf8Q99PV0 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf8Q99PV0 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf8Q99PV0 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Prpf8Q99PV0 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms