Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim11Q99PQ2 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim11Q99PQ2 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.2■□□□□ 0.34
Trim11Q99PQ2 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim11Q99PQ2 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Trim11Q99PQ2 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim11Q99PQ2 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC17.19■□□□□ 0.34
Trim11Q99PQ2 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim11Q99PQ2 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Trim11Q99PQ2 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim11Q99PQ2 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim11Q99PQ2 Gm5682-201ENSMUST00000173402 505 ntBASIC17.19■□□□□ 0.34
Trim11Q99PQ2 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim11Q99PQ2 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim11Q99PQ2 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.19■□□□□ 0.34
Trim11Q99PQ2 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim11Q99PQ2 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim11Q99PQ2 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim11Q99PQ2 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim11Q99PQ2 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim11Q99PQ2 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim11Q99PQ2 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim11Q99PQ2 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim11Q99PQ2 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim11Q99PQ2 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.18■□□□□ 0.34
Trim11Q99PQ2 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim11Q99PQ2 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim11Q99PQ2 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim11Q99PQ2 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim11Q99PQ2 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim11Q99PQ2 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim11Q99PQ2 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim11Q99PQ2 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.18■□□□□ 0.34
Trim11Q99PQ2 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Trim11Q99PQ2 Gm7230-201ENSMUST00000173026 815 ntBASIC17.18■□□□□ 0.34
Trim11Q99PQ2 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC17.18■□□□□ 0.34
Trim11Q99PQ2 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC17.18■□□□□ 0.34
Trim11Q99PQ2 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim11Q99PQ2 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim11Q99PQ2 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trim11Q99PQ2 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim11Q99PQ2 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim11Q99PQ2 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim11Q99PQ2 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim11Q99PQ2 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.18■□□□□ 0.34
Trim11Q99PQ2 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim11Q99PQ2 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.18■□□□□ 0.34
Trim11Q99PQ2 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Trim11Q99PQ2 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim11Q99PQ2 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim11Q99PQ2 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim11Q99PQ2 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim11Q99PQ2 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.17■□□□□ 0.34
Trim11Q99PQ2 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim11Q99PQ2 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.17■□□□□ 0.34
Trim11Q99PQ2 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Trim11Q99PQ2 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.17■□□□□ 0.34
Trim11Q99PQ2 Gm5184-201ENSMUST00000220417 1702 ntBASIC17.17■□□□□ 0.34
Trim11Q99PQ2 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim11Q99PQ2 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim11Q99PQ2 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim11Q99PQ2 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim11Q99PQ2 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim11Q99PQ2 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim11Q99PQ2 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim11Q99PQ2 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim11Q99PQ2 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim11Q99PQ2 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim11Q99PQ2 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim11Q99PQ2 Gm11960-202ENSMUST00000181063 2858 ntBASIC17.16■□□□□ 0.34
Trim11Q99PQ2 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim11Q99PQ2 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Trim11Q99PQ2 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim11Q99PQ2 Camk2g-217ENSMUST00000226630 1937 ntBASIC17.16■□□□□ 0.34
Trim11Q99PQ2 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Trim11Q99PQ2 Gm11764-201ENSMUST00000120221 623 ntBASIC17.16■□□□□ 0.34
Trim11Q99PQ2 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim11Q99PQ2 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC17.16■□□□□ 0.34
Trim11Q99PQ2 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC17.16■□□□□ 0.34
Trim11Q99PQ2 Gm17971-201ENSMUST00000190239 806 ntBASIC17.16■□□□□ 0.34
Trim11Q99PQ2 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.16■□□□□ 0.34
Trim11Q99PQ2 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim11Q99PQ2 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim11Q99PQ2 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim11Q99PQ2 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim11Q99PQ2 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC17.16■□□□□ 0.34
Trim11Q99PQ2 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim11Q99PQ2 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim11Q99PQ2 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Trim11Q99PQ2 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC17.16■□□□□ 0.34
Trim11Q99PQ2 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
Trim11Q99PQ2 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Trim11Q99PQ2 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim11Q99PQ2 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim11Q99PQ2 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim11Q99PQ2 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.15■□□□□ 0.34
Trim11Q99PQ2 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim11Q99PQ2 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim11Q99PQ2 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim11Q99PQ2 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms