Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rtn4Q99P72 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rtn4Q99P72 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rtn4Q99P72 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rtn4Q99P72 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rtn4Q99P72 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
Rtn4Q99P72 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rtn4Q99P72 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Rtn4Q99P72 AC115863.1-201ENSMUST00000214815 1813 ntBASIC19.35■□□□□ 0.69
Rtn4Q99P72 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rtn4Q99P72 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rtn4Q99P72 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Rtn4Q99P72 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rtn4Q99P72 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rtn4Q99P72 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rtn4Q99P72 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rtn4Q99P72 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
Rtn4Q99P72 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Rtn4Q99P72 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rtn4Q99P72 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC19.34■□□□□ 0.69
Rtn4Q99P72 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC19.34■□□□□ 0.69
Rtn4Q99P72 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Rtn4Q99P72 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rtn4Q99P72 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC19.34■□□□□ 0.69
Rtn4Q99P72 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC19.34■□□□□ 0.69
Rtn4Q99P72 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rtn4Q99P72 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rtn4Q99P72 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rtn4Q99P72 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rtn4Q99P72 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rtn4Q99P72 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rtn4Q99P72 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rtn4Q99P72 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rtn4Q99P72 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rtn4Q99P72 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Rtn4Q99P72 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rtn4Q99P72 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rtn4Q99P72 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rtn4Q99P72 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Rtn4Q99P72 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rtn4Q99P72 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Rtn4Q99P72 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Rtn4Q99P72 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rtn4Q99P72 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC19.33■□□□□ 0.68
Rtn4Q99P72 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC19.33■□□□□ 0.68
Rtn4Q99P72 Gm25025-201ENSMUST00000175018 111 ntBASIC19.33■□□□□ 0.68
Rtn4Q99P72 Gm4899-201ENSMUST00000178708 719 ntBASIC19.33■□□□□ 0.68
Rtn4Q99P72 Gm37153-201ENSMUST00000193637 231 ntBASIC19.33■□□□□ 0.68
Rtn4Q99P72 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC19.33■□□□□ 0.68
Rtn4Q99P72 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rtn4Q99P72 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rtn4Q99P72 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rtn4Q99P72 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC19.33■□□□□ 0.68
Rtn4Q99P72 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rtn4Q99P72 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Rtn4Q99P72 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rtn4Q99P72 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC19.33■□□□□ 0.68
Rtn4Q99P72 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rtn4Q99P72 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rtn4Q99P72 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rtn4Q99P72 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn4Q99P72 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn4Q99P72 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn4Q99P72 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn4Q99P72 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn4Q99P72 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn4Q99P72 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn4Q99P72 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn4Q99P72 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC19.32■□□□□ 0.68
Rtn4Q99P72 Gm6257-201ENSMUST00000163864 910 ntBASIC19.32■□□□□ 0.68
Rtn4Q99P72 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn4Q99P72 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Rtn4Q99P72 AC084391.1-201ENSMUST00000200651 141 ntBASIC19.32■□□□□ 0.68
Rtn4Q99P72 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC19.32■□□□□ 0.68
Rtn4Q99P72 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC19.32■□□□□ 0.68
Rtn4Q99P72 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC19.32■□□□□ 0.68
Rtn4Q99P72 AC122024.2-201ENSMUST00000220086 871 ntBASIC19.32■□□□□ 0.68
Rtn4Q99P72 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn4Q99P72 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn4Q99P72 AC131709.1-201ENSMUST00000224731 1180 ntBASIC19.32■□□□□ 0.68
Rtn4Q99P72 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn4Q99P72 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Rtn4Q99P72 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn4Q99P72 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Rtn4Q99P72 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC19.32■□□□□ 0.68
Rtn4Q99P72 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Rtn4Q99P72 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn4Q99P72 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn4Q99P72 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn4Q99P72 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC19.32■□□□□ 0.68
Rtn4Q99P72 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn4Q99P72 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn4Q99P72 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC19.32■□□□□ 0.68
Rtn4Q99P72 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn4Q99P72 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn4Q99P72 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn4Q99P72 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn4Q99P72 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC19.31■□□□□ 0.68
Rtn4Q99P72 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Rtn4Q99P72 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms