Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Msh4Q99MT2 Gm15358-201ENSMUST00000119249 520 ntBASIC14.7□□□□□ -0.06
Msh4Q99MT2 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Msh4Q99MT2 Gm5682-201ENSMUST00000173402 505 ntBASIC14.7□□□□□ -0.06
Msh4Q99MT2 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Msh4Q99MT2 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.7□□□□□ -0.06
Msh4Q99MT2 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.7□□□□□ -0.06
Msh4Q99MT2 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.7□□□□□ -0.06
Msh4Q99MT2 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Msh4Q99MT2 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.7□□□□□ -0.06
Msh4Q99MT2 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Msh4Q99MT2 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Msh4Q99MT2 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Msh4Q99MT2 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Msh4Q99MT2 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Msh4Q99MT2 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Msh4Q99MT2 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Msh4Q99MT2 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Msh4Q99MT2 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Msh4Q99MT2 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.69□□□□□ -0.06
Msh4Q99MT2 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Msh4Q99MT2 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Msh4Q99MT2 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Msh4Q99MT2 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.69□□□□□ -0.06
Msh4Q99MT2 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.69□□□□□ -0.06
Msh4Q99MT2 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Msh4Q99MT2 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Msh4Q99MT2 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.69□□□□□ -0.06
Msh4Q99MT2 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
Msh4Q99MT2 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Msh4Q99MT2 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Msh4Q99MT2 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.69□□□□□ -0.06
Msh4Q99MT2 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Msh4Q99MT2 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Msh4Q99MT2 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.69□□□□□ -0.06
Msh4Q99MT2 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Msh4Q99MT2 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Msh4Q99MT2 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Msh4Q99MT2 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Msh4Q99MT2 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Msh4Q99MT2 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Msh4Q99MT2 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Msh4Q99MT2 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Msh4Q99MT2 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Msh4Q99MT2 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msh4Q99MT2 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msh4Q99MT2 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msh4Q99MT2 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.68□□□□□ -0.06
Msh4Q99MT2 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Msh4Q99MT2 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msh4Q99MT2 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Msh4Q99MT2 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Msh4Q99MT2 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msh4Q99MT2 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Msh4Q99MT2 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Msh4Q99MT2 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msh4Q99MT2 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msh4Q99MT2 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msh4Q99MT2 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msh4Q99MT2 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msh4Q99MT2 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.68□□□□□ -0.06
Msh4Q99MT2 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.68□□□□□ -0.06
Msh4Q99MT2 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.68□□□□□ -0.06
Msh4Q99MT2 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.68□□□□□ -0.06
Msh4Q99MT2 Gm27525-201ENSMUST00000184465 107 ntBASIC14.68□□□□□ -0.06
Msh4Q99MT2 Gm27628-201ENSMUST00000184911 107 ntBASIC14.68□□□□□ -0.06
Msh4Q99MT2 Gm5364-201ENSMUST00000216789 889 ntBASIC14.68□□□□□ -0.06
Msh4Q99MT2 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msh4Q99MT2 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Msh4Q99MT2 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Msh4Q99MT2 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msh4Q99MT2 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Msh4Q99MT2 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msh4Q99MT2 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msh4Q99MT2 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msh4Q99MT2 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msh4Q99MT2 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Msh4Q99MT2 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msh4Q99MT2 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msh4Q99MT2 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh4Q99MT2 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh4Q99MT2 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh4Q99MT2 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh4Q99MT2 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh4Q99MT2 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Msh4Q99MT2 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Msh4Q99MT2 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Msh4Q99MT2 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.67□□□□□ -0.06
Msh4Q99MT2 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh4Q99MT2 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.67□□□□□ -0.06
Msh4Q99MT2 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.67□□□□□ -0.06
Msh4Q99MT2 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.67□□□□□ -0.06
Msh4Q99MT2 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Msh4Q99MT2 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.67□□□□□ -0.06
Msh4Q99MT2 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.67□□□□□ -0.06
Msh4Q99MT2 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh4Q99MT2 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh4Q99MT2 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh4Q99MT2 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh4Q99MT2 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms