Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Col25a1Q99MQ5 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Col25a1Q99MQ5 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col25a1Q99MQ5 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Col25a1Q99MQ5 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Col25a1Q99MQ5 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col25a1Q99MQ5 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col25a1Q99MQ5 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col25a1Q99MQ5 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC15.58■□□□□ 0.08
Col25a1Q99MQ5 Gm12960-201ENSMUST00000120017 1066 ntBASIC15.58■□□□□ 0.08
Col25a1Q99MQ5 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.58■□□□□ 0.08
Col25a1Q99MQ5 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC15.58■□□□□ 0.08
Col25a1Q99MQ5 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC15.58■□□□□ 0.08
Col25a1Q99MQ5 Gm8062-201ENSMUST00000139696 444 ntBASIC15.58■□□□□ 0.08
Col25a1Q99MQ5 Gm9002-201ENSMUST00000178437 499 ntBASIC15.58■□□□□ 0.08
Col25a1Q99MQ5 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Col25a1Q99MQ5 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC15.58■□□□□ 0.08
Col25a1Q99MQ5 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Col25a1Q99MQ5 Gm42612-201ENSMUST00000197986 623 ntBASIC15.58■□□□□ 0.08
Col25a1Q99MQ5 Gm43170-201ENSMUST00000199827 612 ntBASIC15.58■□□□□ 0.08
Col25a1Q99MQ5 Gm18753-201ENSMUST00000201000 566 ntBASIC15.58■□□□□ 0.08
Col25a1Q99MQ5 Gm45195-201ENSMUST00000205597 1008 ntBASIC15.58■□□□□ 0.08
Col25a1Q99MQ5 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC15.58■□□□□ 0.08
Col25a1Q99MQ5 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col25a1Q99MQ5 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.58■□□□□ 0.08
Col25a1Q99MQ5 Gm8399-201ENSMUST00000082300 1117 ntBASIC15.58■□□□□ 0.08
Col25a1Q99MQ5 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col25a1Q99MQ5 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col25a1Q99MQ5 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Col25a1Q99MQ5 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col25a1Q99MQ5 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col25a1Q99MQ5 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col25a1Q99MQ5 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col25a1Q99MQ5 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col25a1Q99MQ5 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col25a1Q99MQ5 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col25a1Q99MQ5 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Col25a1Q99MQ5 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col25a1Q99MQ5 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Col25a1Q99MQ5 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col25a1Q99MQ5 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
Col25a1Q99MQ5 Asic1-205ENSMUST00000228185 1818 ntBASIC15.57■□□□□ 0.08
Col25a1Q99MQ5 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Col25a1Q99MQ5 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col25a1Q99MQ5 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Col25a1Q99MQ5 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col25a1Q99MQ5 Gm15782-201ENSMUST00000121073 445 ntBASIC15.57■□□□□ 0.08
Col25a1Q99MQ5 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col25a1Q99MQ5 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC15.57■□□□□ 0.08
Col25a1Q99MQ5 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Col25a1Q99MQ5 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col25a1Q99MQ5 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC15.57■□□□□ 0.08
Col25a1Q99MQ5 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col25a1Q99MQ5 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col25a1Q99MQ5 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col25a1Q99MQ5 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col25a1Q99MQ5 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col25a1Q99MQ5 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Col25a1Q99MQ5 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col25a1Q99MQ5 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.57■□□□□ 0.08
Col25a1Q99MQ5 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col25a1Q99MQ5 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col25a1Q99MQ5 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col25a1Q99MQ5 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col25a1Q99MQ5 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col25a1Q99MQ5 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col25a1Q99MQ5 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col25a1Q99MQ5 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col25a1Q99MQ5 Gm4204-201ENSMUST00000110798 1231 ntBASIC15.56■□□□□ 0.08
Col25a1Q99MQ5 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Col25a1Q99MQ5 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Col25a1Q99MQ5 Gm38225-201ENSMUST00000194001 393 ntBASIC15.56■□□□□ 0.08
Col25a1Q99MQ5 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col25a1Q99MQ5 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Col25a1Q99MQ5 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Col25a1Q99MQ5 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.56■□□□□ 0.08
Col25a1Q99MQ5 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col25a1Q99MQ5 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col25a1Q99MQ5 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col25a1Q99MQ5 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col25a1Q99MQ5 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col25a1Q99MQ5 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Col25a1Q99MQ5 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col25a1Q99MQ5 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col25a1Q99MQ5 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Col25a1Q99MQ5 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col25a1Q99MQ5 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Col25a1Q99MQ5 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Col25a1Q99MQ5 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col25a1Q99MQ5 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col25a1Q99MQ5 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col25a1Q99MQ5 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Col25a1Q99MQ5 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col25a1Q99MQ5 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col25a1Q99MQ5 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col25a1Q99MQ5 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Col25a1Q99MQ5 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col25a1Q99MQ5 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Col25a1Q99MQ5 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Col25a1Q99MQ5 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms