Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp1b1Q99LU0 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp1b1Q99LU0 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp1b1Q99LU0 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp1b1Q99LU0 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp1b1Q99LU0 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.26□□□□□ -0.13
Chmp1b1Q99LU0 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp1b1Q99LU0 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp1b1Q99LU0 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Chmp1b1Q99LU0 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp1b1Q99LU0 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp1b1Q99LU0 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp1b1Q99LU0 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Chmp1b1Q99LU0 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp1b1Q99LU0 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Chmp1b1Q99LU0 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp1b1Q99LU0 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp1b1Q99LU0 Gm13418-201ENSMUST00000119097 944 ntBASIC14.26□□□□□ -0.13
Chmp1b1Q99LU0 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp1b1Q99LU0 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.26□□□□□ -0.13
Chmp1b1Q99LU0 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp1b1Q99LU0 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.26□□□□□ -0.13
Chmp1b1Q99LU0 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp1b1Q99LU0 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.26□□□□□ -0.13
Chmp1b1Q99LU0 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.26□□□□□ -0.13
Chmp1b1Q99LU0 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp1b1Q99LU0 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.26□□□□□ -0.13
Chmp1b1Q99LU0 Rps4l-201ENSMUST00000071745 943 ntBASIC14.26□□□□□ -0.13
Chmp1b1Q99LU0 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp1b1Q99LU0 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp1b1Q99LU0 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp1b1Q99LU0 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.26□□□□□ -0.13
Chmp1b1Q99LU0 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Chmp1b1Q99LU0 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp1b1Q99LU0 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.25□□□□□ -0.13
Chmp1b1Q99LU0 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp1b1Q99LU0 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.25□□□□□ -0.13
Chmp1b1Q99LU0 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp1b1Q99LU0 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp1b1Q99LU0 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp1b1Q99LU0 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.25□□□□□ -0.13
Chmp1b1Q99LU0 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Chmp1b1Q99LU0 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp1b1Q99LU0 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp1b1Q99LU0 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp1b1Q99LU0 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp1b1Q99LU0 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp1b1Q99LU0 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.25□□□□□ -0.13
Chmp1b1Q99LU0 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp1b1Q99LU0 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.25□□□□□ -0.13
Chmp1b1Q99LU0 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.25□□□□□ -0.13
Chmp1b1Q99LU0 Gm44357-201ENSMUST00000195897 142 ntBASIC14.25□□□□□ -0.13
Chmp1b1Q99LU0 Gm19658-201ENSMUST00000196231 138 ntBASIC14.25□□□□□ -0.13
Chmp1b1Q99LU0 Gm44367-201ENSMUST00000196836 138 ntBASIC14.25□□□□□ -0.13
Chmp1b1Q99LU0 Gm44350-201ENSMUST00000197197 138 ntBASIC14.25□□□□□ -0.13
Chmp1b1Q99LU0 Gm44390-201ENSMUST00000197533 144 ntBASIC14.25□□□□□ -0.13
Chmp1b1Q99LU0 Gm44313-201ENSMUST00000198018 138 ntBASIC14.25□□□□□ -0.13
Chmp1b1Q99LU0 Gm44486-201ENSMUST00000198508 138 ntBASIC14.25□□□□□ -0.13
Chmp1b1Q99LU0 Gm44314-201ENSMUST00000199263 138 ntBASIC14.25□□□□□ -0.13
Chmp1b1Q99LU0 Gm44394-201ENSMUST00000199558 138 ntBASIC14.25□□□□□ -0.13
Chmp1b1Q99LU0 Gm44484-201ENSMUST00000199873 138 ntBASIC14.25□□□□□ -0.13
Chmp1b1Q99LU0 Gm44466-201ENSMUST00000200264 138 ntBASIC14.25□□□□□ -0.13
Chmp1b1Q99LU0 Gm44359-201ENSMUST00000200671 138 ntBASIC14.25□□□□□ -0.13
Chmp1b1Q99LU0 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.25□□□□□ -0.13
Chmp1b1Q99LU0 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp1b1Q99LU0 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.25□□□□□ -0.13
Chmp1b1Q99LU0 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp1b1Q99LU0 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp1b1Q99LU0 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp1b1Q99LU0 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp1b1Q99LU0 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp1b1Q99LU0 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp1b1Q99LU0 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Chmp1b1Q99LU0 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp1b1Q99LU0 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp1b1Q99LU0 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Chmp1b1Q99LU0 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp1b1Q99LU0 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.24□□□□□ -0.13
Chmp1b1Q99LU0 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp1b1Q99LU0 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp1b1Q99LU0 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp1b1Q99LU0 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp1b1Q99LU0 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.24□□□□□ -0.13
Chmp1b1Q99LU0 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp1b1Q99LU0 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Chmp1b1Q99LU0 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Chmp1b1Q99LU0 Gm13884-201ENSMUST00000118103 829 ntBASIC14.24□□□□□ -0.13
Chmp1b1Q99LU0 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp1b1Q99LU0 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Chmp1b1Q99LU0 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp1b1Q99LU0 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.24□□□□□ -0.13
Chmp1b1Q99LU0 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.24□□□□□ -0.13
Chmp1b1Q99LU0 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.24□□□□□ -0.13
Chmp1b1Q99LU0 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Chmp1b1Q99LU0 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.24□□□□□ -0.13
Chmp1b1Q99LU0 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.24□□□□□ -0.13
Chmp1b1Q99LU0 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Chmp1b1Q99LU0 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp1b1Q99LU0 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp1b1Q99LU0 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms