Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rfc4Q99J62 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.33■□□□□ 0.37
Rfc4Q99J62 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfc4Q99J62 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfc4Q99J62 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfc4Q99J62 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfc4Q99J62 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfc4Q99J62 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfc4Q99J62 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.33■□□□□ 0.36
Rfc4Q99J62 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfc4Q99J62 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.33■□□□□ 0.36
Rfc4Q99J62 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfc4Q99J62 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfc4Q99J62 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfc4Q99J62 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfc4Q99J62 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Rfc4Q99J62 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
Rfc4Q99J62 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfc4Q99J62 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfc4Q99J62 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfc4Q99J62 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Rfc4Q99J62 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rfc4Q99J62 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC17.32■□□□□ 0.36
Rfc4Q99J62 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rfc4Q99J62 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rfc4Q99J62 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rfc4Q99J62 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC17.32■□□□□ 0.36
Rfc4Q99J62 Gm8116-201ENSMUST00000182917 1201 ntBASIC17.32■□□□□ 0.36
Rfc4Q99J62 Gm43438-201ENSMUST00000198133 379 ntBASIC17.32■□□□□ 0.36
Rfc4Q99J62 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rfc4Q99J62 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Rfc4Q99J62 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfc4Q99J62 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfc4Q99J62 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Rfc4Q99J62 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfc4Q99J62 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfc4Q99J62 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfc4Q99J62 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfc4Q99J62 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Rfc4Q99J62 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Rfc4Q99J62 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfc4Q99J62 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfc4Q99J62 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfc4Q99J62 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.32■□□□□ 0.36
Rfc4Q99J62 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfc4Q99J62 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfc4Q99J62 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfc4Q99J62 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rfc4Q99J62 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.31■□□□□ 0.36
Rfc4Q99J62 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.31■□□□□ 0.36
Rfc4Q99J62 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfc4Q99J62 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfc4Q99J62 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfc4Q99J62 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rfc4Q99J62 Gm29541-201ENSMUST00000191351 678 ntBASIC17.31■□□□□ 0.36
Rfc4Q99J62 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Rfc4Q99J62 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rfc4Q99J62 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfc4Q99J62 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfc4Q99J62 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfc4Q99J62 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rfc4Q99J62 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC17.31■□□□□ 0.36
Rfc4Q99J62 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfc4Q99J62 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfc4Q99J62 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfc4Q99J62 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Rfc4Q99J62 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.3■□□□□ 0.36
Rfc4Q99J62 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfc4Q99J62 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfc4Q99J62 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC17.3■□□□□ 0.36
Rfc4Q99J62 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfc4Q99J62 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfc4Q99J62 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Rfc4Q99J62 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Rfc4Q99J62 Gm13015-201ENSMUST00000118674 204 ntBASIC17.3■□□□□ 0.36
Rfc4Q99J62 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rfc4Q99J62 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC17.3■□□□□ 0.36
Rfc4Q99J62 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rfc4Q99J62 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC17.3■□□□□ 0.36
Rfc4Q99J62 Gm27920-201ENSMUST00000183953 96 ntBASIC17.3■□□□□ 0.36
Rfc4Q99J62 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfc4Q99J62 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Rfc4Q99J62 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfc4Q99J62 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfc4Q99J62 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfc4Q99J62 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfc4Q99J62 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Rfc4Q99J62 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfc4Q99J62 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfc4Q99J62 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfc4Q99J62 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfc4Q99J62 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
Rfc4Q99J62 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rfc4Q99J62 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rfc4Q99J62 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Rfc4Q99J62 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Rfc4Q99J62 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfc4Q99J62 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfc4Q99J62 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Rfc4Q99J62 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms