Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Thumpd1Q99J36 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Thumpd1Q99J36 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Thumpd1Q99J36 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Thumpd1Q99J36 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Thumpd1Q99J36 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Thumpd1Q99J36 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Thumpd1Q99J36 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Thumpd1Q99J36 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC13.45□□□□□ -0.26
Thumpd1Q99J36 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.45□□□□□ -0.26
Thumpd1Q99J36 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.45□□□□□ -0.26
Thumpd1Q99J36 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Thumpd1Q99J36 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Thumpd1Q99J36 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Thumpd1Q99J36 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Thumpd1Q99J36 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Thumpd1Q99J36 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Thumpd1Q99J36 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Thumpd1Q99J36 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Thumpd1Q99J36 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Thumpd1Q99J36 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Thumpd1Q99J36 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Thumpd1Q99J36 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Thumpd1Q99J36 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Thumpd1Q99J36 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Thumpd1Q99J36 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Thumpd1Q99J36 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Thumpd1Q99J36 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Thumpd1Q99J36 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Thumpd1Q99J36 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.44□□□□□ -0.26
Thumpd1Q99J36 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Thumpd1Q99J36 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Thumpd1Q99J36 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Thumpd1Q99J36 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Thumpd1Q99J36 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Thumpd1Q99J36 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Thumpd1Q99J36 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Thumpd1Q99J36 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Thumpd1Q99J36 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Thumpd1Q99J36 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Thumpd1Q99J36 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Thumpd1Q99J36 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.44□□□□□ -0.26
Thumpd1Q99J36 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Thumpd1Q99J36 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Thumpd1Q99J36 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.44□□□□□ -0.26
Thumpd1Q99J36 Gm18622-201ENSMUST00000219361 595 ntBASIC13.44□□□□□ -0.26
Thumpd1Q99J36 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Thumpd1Q99J36 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Thumpd1Q99J36 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Thumpd1Q99J36 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Thumpd1Q99J36 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Thumpd1Q99J36 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Thumpd1Q99J36 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Thumpd1Q99J36 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Thumpd1Q99J36 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Thumpd1Q99J36 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Thumpd1Q99J36 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Thumpd1Q99J36 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
Thumpd1Q99J36 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Thumpd1Q99J36 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Thumpd1Q99J36 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Thumpd1Q99J36 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Thumpd1Q99J36 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Thumpd1Q99J36 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Thumpd1Q99J36 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Thumpd1Q99J36 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Thumpd1Q99J36 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.43□□□□□ -0.26
Thumpd1Q99J36 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Thumpd1Q99J36 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Thumpd1Q99J36 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Thumpd1Q99J36 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
Thumpd1Q99J36 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Thumpd1Q99J36 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.43□□□□□ -0.26
Thumpd1Q99J36 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Thumpd1Q99J36 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Thumpd1Q99J36 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.43□□□□□ -0.26
Thumpd1Q99J36 Gm15794-201ENSMUST00000120182 631 ntBASIC13.43□□□□□ -0.26
Thumpd1Q99J36 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Thumpd1Q99J36 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.43□□□□□ -0.26
Thumpd1Q99J36 AC153881.2-201ENSMUST00000214877 204 ntBASIC13.43□□□□□ -0.26
Thumpd1Q99J36 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Thumpd1Q99J36 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Thumpd1Q99J36 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Thumpd1Q99J36 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Thumpd1Q99J36 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Thumpd1Q99J36 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Thumpd1Q99J36 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Thumpd1Q99J36 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Thumpd1Q99J36 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Thumpd1Q99J36 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Thumpd1Q99J36 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Thumpd1Q99J36 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Thumpd1Q99J36 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Thumpd1Q99J36 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd1Q99J36 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Thumpd1Q99J36 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd1Q99J36 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd1Q99J36 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd1Q99J36 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Thumpd1Q99J36 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms