Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col20a1Q923P0 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col20a1Q923P0 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.76■□□□□ 0.43
Col20a1Q923P0 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Col20a1Q923P0 Gm42934-201ENSMUST00000196920 1345 ntBASIC17.76■□□□□ 0.43
Col20a1Q923P0 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col20a1Q923P0 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col20a1Q923P0 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col20a1Q923P0 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col20a1Q923P0 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col20a1Q923P0 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Col20a1Q923P0 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col20a1Q923P0 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Col20a1Q923P0 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Col20a1Q923P0 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC17.75■□□□□ 0.43
Col20a1Q923P0 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Col20a1Q923P0 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Col20a1Q923P0 AA543401-201ENSMUST00000164248 1269 ntBASIC17.75■□□□□ 0.43
Col20a1Q923P0 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col20a1Q923P0 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC17.75■□□□□ 0.43
Col20a1Q923P0 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.75■□□□□ 0.43
Col20a1Q923P0 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.75■□□□□ 0.43
Col20a1Q923P0 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Col20a1Q923P0 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col20a1Q923P0 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col20a1Q923P0 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col20a1Q923P0 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col20a1Q923P0 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col20a1Q923P0 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Col20a1Q923P0 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Col20a1Q923P0 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col20a1Q923P0 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Col20a1Q923P0 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC17.75■□□□□ 0.43
Col20a1Q923P0 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col20a1Q923P0 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC17.75■□□□□ 0.43
Col20a1Q923P0 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Col20a1Q923P0 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col20a1Q923P0 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col20a1Q923P0 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Col20a1Q923P0 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col20a1Q923P0 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.74■□□□□ 0.43
Col20a1Q923P0 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col20a1Q923P0 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col20a1Q923P0 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col20a1Q923P0 Gm22175-201ENSMUST00000175007 78 ntBASIC17.74■□□□□ 0.43
Col20a1Q923P0 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col20a1Q923P0 Gm27920-201ENSMUST00000183953 96 ntBASIC17.74■□□□□ 0.43
Col20a1Q923P0 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col20a1Q923P0 Gm38225-201ENSMUST00000194001 393 ntBASIC17.74■□□□□ 0.43
Col20a1Q923P0 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Col20a1Q923P0 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.74■□□□□ 0.43
Col20a1Q923P0 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
Col20a1Q923P0 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col20a1Q923P0 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col20a1Q923P0 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Col20a1Q923P0 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col20a1Q923P0 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col20a1Q923P0 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col20a1Q923P0 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col20a1Q923P0 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Col20a1Q923P0 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col20a1Q923P0 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Col20a1Q923P0 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col20a1Q923P0 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col20a1Q923P0 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col20a1Q923P0 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col20a1Q923P0 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col20a1Q923P0 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col20a1Q923P0 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col20a1Q923P0 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col20a1Q923P0 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Col20a1Q923P0 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Col20a1Q923P0 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC17.73■□□□□ 0.43
Col20a1Q923P0 Gm27430-201ENSMUST00000184585 107 ntBASIC17.73■□□□□ 0.43
Col20a1Q923P0 Gm44333-201ENSMUST00000197168 107 ntBASIC17.73■□□□□ 0.43
Col20a1Q923P0 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col20a1Q923P0 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC17.73■□□□□ 0.43
Col20a1Q923P0 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col20a1Q923P0 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col20a1Q923P0 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col20a1Q923P0 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC17.73■□□□□ 0.43
Col20a1Q923P0 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col20a1Q923P0 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col20a1Q923P0 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col20a1Q923P0 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Col20a1Q923P0 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col20a1Q923P0 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col20a1Q923P0 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col20a1Q923P0 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.73■□□□□ 0.43
Col20a1Q923P0 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col20a1Q923P0 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col20a1Q923P0 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col20a1Q923P0 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col20a1Q923P0 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col20a1Q923P0 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col20a1Q923P0 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col20a1Q923P0 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col20a1Q923P0 Gm7336-201ENSMUST00000107041 1232 ntBASIC17.72■□□□□ 0.43
Col20a1Q923P0 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC17.72■□□□□ 0.43
Col20a1Q923P0 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms