Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdha11Q91Y19 Gm15427-201ENSMUST00000117288 531 ntBASIC15.84■□□□□ 0.13
Pcdha11Q91Y19 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.84■□□□□ 0.13
Pcdha11Q91Y19 Gm16198-201ENSMUST00000118766 670 ntBASIC15.84■□□□□ 0.13
Pcdha11Q91Y19 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.84■□□□□ 0.13
Pcdha11Q91Y19 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.84■□□□□ 0.13
Pcdha11Q91Y19 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.84■□□□□ 0.13
Pcdha11Q91Y19 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdha11Q91Y19 Gm2272-201ENSMUST00000194903 582 ntBASIC15.84■□□□□ 0.13
Pcdha11Q91Y19 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.84■□□□□ 0.13
Pcdha11Q91Y19 Gm10154-201ENSMUST00000084445 354 ntBASIC15.84■□□□□ 0.13
Pcdha11Q91Y19 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdha11Q91Y19 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdha11Q91Y19 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdha11Q91Y19 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdha11Q91Y19 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdha11Q91Y19 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdha11Q91Y19 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdha11Q91Y19 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdha11Q91Y19 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Pcdha11Q91Y19 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Pcdha11Q91Y19 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdha11Q91Y19 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.84■□□□□ 0.13
Pcdha11Q91Y19 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdha11Q91Y19 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Pcdha11Q91Y19 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Pcdha11Q91Y19 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.83■□□□□ 0.13
Pcdha11Q91Y19 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdha11Q91Y19 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdha11Q91Y19 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha11Q91Y19 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha11Q91Y19 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha11Q91Y19 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha11Q91Y19 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha11Q91Y19 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha11Q91Y19 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha11Q91Y19 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha11Q91Y19 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.83■□□□□ 0.12
Pcdha11Q91Y19 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
Pcdha11Q91Y19 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha11Q91Y19 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha11Q91Y19 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha11Q91Y19 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.83■□□□□ 0.12
Pcdha11Q91Y19 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.83■□□□□ 0.12
Pcdha11Q91Y19 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
Pcdha11Q91Y19 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha11Q91Y19 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.83■□□□□ 0.12
Pcdha11Q91Y19 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha11Q91Y19 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha11Q91Y19 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.83■□□□□ 0.12
Pcdha11Q91Y19 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha11Q91Y19 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Pcdha11Q91Y19 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha11Q91Y19 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha11Q91Y19 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Pcdha11Q91Y19 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha11Q91Y19 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha11Q91Y19 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Pcdha11Q91Y19 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha11Q91Y19 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.82■□□□□ 0.12
Pcdha11Q91Y19 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha11Q91Y19 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.82■□□□□ 0.12
Pcdha11Q91Y19 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.82■□□□□ 0.12
Pcdha11Q91Y19 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.82■□□□□ 0.12
Pcdha11Q91Y19 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.82■□□□□ 0.12
Pcdha11Q91Y19 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.82■□□□□ 0.12
Pcdha11Q91Y19 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.82■□□□□ 0.12
Pcdha11Q91Y19 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha11Q91Y19 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha11Q91Y19 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha11Q91Y19 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha11Q91Y19 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha11Q91Y19 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha11Q91Y19 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.82■□□□□ 0.12
Pcdha11Q91Y19 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha11Q91Y19 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha11Q91Y19 Celf4-206ENSMUST00000224553 1729 ntBASIC15.82■□□□□ 0.12
Pcdha11Q91Y19 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha11Q91Y19 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha11Q91Y19 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.82■□□□□ 0.12
Pcdha11Q91Y19 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Pcdha11Q91Y19 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha11Q91Y19 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.82■□□□□ 0.12
Pcdha11Q91Y19 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdha11Q91Y19 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha11Q91Y19 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha11Q91Y19 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha11Q91Y19 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha11Q91Y19 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha11Q91Y19 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha11Q91Y19 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha11Q91Y19 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha11Q91Y19 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.81■□□□□ 0.12
Pcdha11Q91Y19 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha11Q91Y19 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.81■□□□□ 0.12
Pcdha11Q91Y19 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha11Q91Y19 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha11Q91Y19 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.81■□□□□ 0.12
Pcdha11Q91Y19 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.81■□□□□ 0.12
Pcdha11Q91Y19 Gm43575-201ENSMUST00000196420 516 ntBASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms