Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha2Q91Y17 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha2Q91Y17 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha2Q91Y17 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
Pcdha2Q91Y17 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha2Q91Y17 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha2Q91Y17 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Pcdha2Q91Y17 Gm8597-201ENSMUST00000191525 1109 ntBASIC16.03■□□□□ 0.16
Pcdha2Q91Y17 Gm45612-201ENSMUST00000211320 160 ntBASIC16.03■□□□□ 0.16
Pcdha2Q91Y17 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Pcdha2Q91Y17 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.03■□□□□ 0.16
Pcdha2Q91Y17 Gm5867-201ENSMUST00000063197 592 ntBASIC16.03■□□□□ 0.16
Pcdha2Q91Y17 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Pcdha2Q91Y17 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.03■□□□□ 0.16
Pcdha2Q91Y17 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha2Q91Y17 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha2Q91Y17 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha2Q91Y17 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha2Q91Y17 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.03■□□□□ 0.16
Pcdha2Q91Y17 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha2Q91Y17 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha2Q91Y17 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Pcdha2Q91Y17 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC16.03■□□□□ 0.16
Pcdha2Q91Y17 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha2Q91Y17 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdha2Q91Y17 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdha2Q91Y17 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdha2Q91Y17 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdha2Q91Y17 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdha2Q91Y17 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdha2Q91Y17 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdha2Q91Y17 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Pcdha2Q91Y17 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdha2Q91Y17 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdha2Q91Y17 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Pcdha2Q91Y17 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
Pcdha2Q91Y17 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.02■□□□□ 0.16
Pcdha2Q91Y17 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdha2Q91Y17 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC16.02■□□□□ 0.16
Pcdha2Q91Y17 Gm2213-201ENSMUST00000197485 688 ntBASIC16.02■□□□□ 0.16
Pcdha2Q91Y17 Ndufaf2-202ENSMUST00000223734 556 ntBASIC16.02■□□□□ 0.16
Pcdha2Q91Y17 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.02■□□□□ 0.16
Pcdha2Q91Y17 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdha2Q91Y17 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdha2Q91Y17 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdha2Q91Y17 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Pcdha2Q91Y17 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdha2Q91Y17 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdha2Q91Y17 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdha2Q91Y17 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdha2Q91Y17 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdha2Q91Y17 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdha2Q91Y17 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdha2Q91Y17 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.02■□□□□ 0.15
Pcdha2Q91Y17 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Pcdha2Q91Y17 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha2Q91Y17 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha2Q91Y17 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha2Q91Y17 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Pcdha2Q91Y17 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.01■□□□□ 0.15
Pcdha2Q91Y17 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha2Q91Y17 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha2Q91Y17 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha2Q91Y17 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha2Q91Y17 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha2Q91Y17 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Pcdha2Q91Y17 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.01■□□□□ 0.15
Pcdha2Q91Y17 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Pcdha2Q91Y17 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha2Q91Y17 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha2Q91Y17 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha2Q91Y17 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha2Q91Y17 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha2Q91Y17 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha2Q91Y17 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha2Q91Y17 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha2Q91Y17 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha2Q91Y17 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha2Q91Y17 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha2Q91Y17 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC16.01■□□□□ 0.15
Pcdha2Q91Y17 Efs-202ENSMUST00000227037 2540 ntBASIC16.01■□□□□ 0.15
Pcdha2Q91Y17 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha2Q91Y17 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha2Q91Y17 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha2Q91Y17 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha2Q91Y17 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdha2Q91Y17 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdha2Q91Y17 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC16■□□□□ 0.15
Pcdha2Q91Y17 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdha2Q91Y17 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdha2Q91Y17 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdha2Q91Y17 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdha2Q91Y17 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdha2Q91Y17 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdha2Q91Y17 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Pcdha2Q91Y17 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdha2Q91Y17 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdha2Q91Y17 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC16■□□□□ 0.15
Pcdha2Q91Y17 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdha2Q91Y17 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms