Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.7□□□□□ -0.06
Pcdhb20Q91XZ9 AC132384.10-201ENSMUST00000217862 1204 ntBASIC14.7□□□□□ -0.06
Pcdhb20Q91XZ9 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC14.7□□□□□ -0.06
Pcdhb20Q91XZ9 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb20Q91XZ9 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Pcdhb20Q91XZ9 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb20Q91XZ9 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Pcdhb20Q91XZ9 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Pcdhb20Q91XZ9 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Pcdhb20Q91XZ9 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb20Q91XZ9 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb20Q91XZ9 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb20Q91XZ9 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb20Q91XZ9 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.7□□□□□ -0.06
Pcdhb20Q91XZ9 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb20Q91XZ9 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb20Q91XZ9 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb20Q91XZ9 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.7□□□□□ -0.06
Pcdhb20Q91XZ9 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb20Q91XZ9 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb20Q91XZ9 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb20Q91XZ9 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb20Q91XZ9 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb20Q91XZ9 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb20Q91XZ9 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb20Q91XZ9 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdhb20Q91XZ9 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb20Q91XZ9 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Pcdhb20Q91XZ9 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb20Q91XZ9 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
Pcdhb20Q91XZ9 Npm1-204ENSMUST00000109354 1157 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb20Q91XZ9 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb20Q91XZ9 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb20Q91XZ9 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.69□□□□□ -0.06
Pcdhb20Q91XZ9 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb20Q91XZ9 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdhb20Q91XZ9 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb20Q91XZ9 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb20Q91XZ9 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.69□□□□□ -0.06
Pcdhb20Q91XZ9 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC14.69□□□□□ -0.06
Pcdhb20Q91XZ9 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb20Q91XZ9 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdhb20Q91XZ9 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb20Q91XZ9 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb20Q91XZ9 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb20Q91XZ9 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb20Q91XZ9 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Pcdhb20Q91XZ9 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb20Q91XZ9 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb20Q91XZ9 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb20Q91XZ9 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.69□□□□□ -0.06
Pcdhb20Q91XZ9 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb20Q91XZ9 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb20Q91XZ9 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb20Q91XZ9 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Pcdhb20Q91XZ9 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Pcdhb20Q91XZ9 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.69□□□□□ -0.06
Pcdhb20Q91XZ9 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb20Q91XZ9 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.69□□□□□ -0.06
Pcdhb20Q91XZ9 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Pcdhb20Q91XZ9 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Pcdhb20Q91XZ9 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb20Q91XZ9 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdhb20Q91XZ9 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb20Q91XZ9 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb20Q91XZ9 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.68□□□□□ -0.06
Pcdhb20Q91XZ9 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb20Q91XZ9 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb20Q91XZ9 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb20Q91XZ9 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.68□□□□□ -0.06
Pcdhb20Q91XZ9 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb20Q91XZ9 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb20Q91XZ9 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb20Q91XZ9 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb20Q91XZ9 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb20Q91XZ9 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Pcdhb20Q91XZ9 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb20Q91XZ9 Gm43052-201ENSMUST00000201451 1628 ntBASIC14.68□□□□□ -0.06
Pcdhb20Q91XZ9 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb20Q91XZ9 Mir669o-201ENSMUST00000103898 96 ntBASIC14.68□□□□□ -0.06
Pcdhb20Q91XZ9 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.68□□□□□ -0.06
Pcdhb20Q91XZ9 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.68□□□□□ -0.06
Pcdhb20Q91XZ9 Gm14494-201ENSMUST00000118786 435 ntBASIC14.68□□□□□ -0.06
Pcdhb20Q91XZ9 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.68□□□□□ -0.06
Pcdhb20Q91XZ9 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.68□□□□□ -0.06
Pcdhb20Q91XZ9 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb20Q91XZ9 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb20Q91XZ9 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.68□□□□□ -0.06
Pcdhb20Q91XZ9 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.68□□□□□ -0.06
Pcdhb20Q91XZ9 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC14.68□□□□□ -0.06
Pcdhb20Q91XZ9 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.68□□□□□ -0.06
Pcdhb20Q91XZ9 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.68□□□□□ -0.06
Pcdhb20Q91XZ9 AC132104.1-201ENSMUST00000213615 260 ntBASIC14.68□□□□□ -0.06
Pcdhb20Q91XZ9 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC14.68□□□□□ -0.06
Pcdhb20Q91XZ9 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb20Q91XZ9 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Pcdhb20Q91XZ9 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb20Q91XZ9 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Pcdhb20Q91XZ9 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb20Q91XZ9 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms