Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhga3Q91XY5 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhga3Q91XY5 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhga3Q91XY5 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhga3Q91XY5 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.47□□□□□ -0.25
Pcdhga3Q91XY5 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhga3Q91XY5 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhga3Q91XY5 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhga3Q91XY5 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhga3Q91XY5 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhga3Q91XY5 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhga3Q91XY5 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhga3Q91XY5 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhga3Q91XY5 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
Pcdhga3Q91XY5 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Pcdhga3Q91XY5 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhga3Q91XY5 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhga3Q91XY5 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhga3Q91XY5 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhga3Q91XY5 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhga3Q91XY5 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhga3Q91XY5 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhga3Q91XY5 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhga3Q91XY5 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Pcdhga3Q91XY5 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhga3Q91XY5 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhga3Q91XY5 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC13.46□□□□□ -0.25
Pcdhga3Q91XY5 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhga3Q91XY5 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC13.46□□□□□ -0.25
Pcdhga3Q91XY5 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.46□□□□□ -0.25
Pcdhga3Q91XY5 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhga3Q91XY5 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhga3Q91XY5 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhga3Q91XY5 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Pcdhga3Q91XY5 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhga3Q91XY5 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhga3Q91XY5 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhga3Q91XY5 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.26
Pcdhga3Q91XY5 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhga3Q91XY5 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhga3Q91XY5 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhga3Q91XY5 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhga3Q91XY5 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhga3Q91XY5 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhga3Q91XY5 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.45□□□□□ -0.26
Pcdhga3Q91XY5 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhga3Q91XY5 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Pcdhga3Q91XY5 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
Pcdhga3Q91XY5 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Pcdhga3Q91XY5 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.45□□□□□ -0.26
Pcdhga3Q91XY5 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
Pcdhga3Q91XY5 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhga3Q91XY5 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Pcdhga3Q91XY5 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.45□□□□□ -0.26
Pcdhga3Q91XY5 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhga3Q91XY5 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.45□□□□□ -0.26
Pcdhga3Q91XY5 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.45□□□□□ -0.26
Pcdhga3Q91XY5 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.45□□□□□ -0.26
Pcdhga3Q91XY5 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhga3Q91XY5 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.45□□□□□ -0.26
Pcdhga3Q91XY5 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhga3Q91XY5 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhga3Q91XY5 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhga3Q91XY5 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhga3Q91XY5 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhga3Q91XY5 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.45□□□□□ -0.26
Pcdhga3Q91XY5 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhga3Q91XY5 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Pcdhga3Q91XY5 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhga3Q91XY5 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhga3Q91XY5 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhga3Q91XY5 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.44□□□□□ -0.26
Pcdhga3Q91XY5 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhga3Q91XY5 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.44□□□□□ -0.26
Pcdhga3Q91XY5 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhga3Q91XY5 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.44□□□□□ -0.26
Pcdhga3Q91XY5 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhga3Q91XY5 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhga3Q91XY5 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhga3Q91XY5 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhga3Q91XY5 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhga3Q91XY5 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Pcdhga3Q91XY5 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC13.44□□□□□ -0.26
Pcdhga3Q91XY5 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.44□□□□□ -0.26
Pcdhga3Q91XY5 Gm11780-201ENSMUST00000136880 516 ntBASIC13.44□□□□□ -0.26
Pcdhga3Q91XY5 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.44□□□□□ -0.26
Pcdhga3Q91XY5 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Pcdhga3Q91XY5 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
Pcdhga3Q91XY5 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC13.44□□□□□ -0.26
Pcdhga3Q91XY5 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhga3Q91XY5 Rps4l-201ENSMUST00000071745 943 ntBASIC13.44□□□□□ -0.26
Pcdhga3Q91XY5 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Pcdhga3Q91XY5 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhga3Q91XY5 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhga3Q91XY5 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Pcdhga3Q91XY5 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Pcdhga3Q91XY5 BC037039-201ENSMUST00000192003 2205 ntBASIC13.44□□□□□ -0.26
Pcdhga3Q91XY5 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhga3Q91XY5 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhga3Q91XY5 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms